Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71197 | Canola | cytosol | 23.1 | 61.54 |
| CDY12174 | Canola | cytosol | 24.91 | 57.02 |
| Bra022241.1-P | Field mustard | cytosol | 95.31 | 53.88 |
| CDY46883 | Canola | cytosol | 93.14 | 53.42 |
| CDY49834 | Canola | cytosol | 92.06 | 52.8 |
| CDX87977 | Canola | cytosol | 42.24 | 51.32 |
| AT3G17760.1 | Thale cress | cytosol | 89.17 | 50.0 |
| CDY16935 | Canola | cytosol | 79.78 | 44.92 |
| CDY15807 | Canola | cytosol | 79.78 | 44.83 |
| CDY09396 | Canola | cytosol | 79.42 | 44.62 |
| CDY04111 | Canola | cytosol | 78.7 | 44.22 |
| KRH38971 | Soybean | cytosol | 79.06 | 43.98 |
| CDX78739 | Canola | cytosol, plastid | 78.7 | 43.95 |
| CDY56295 | Canola | cytosol | 78.34 | 43.93 |
| VIT_17s0000g00920.t01 | Wine grape | cytosol | 79.78 | 43.76 |
| Solyc03g098240.2.1 | Tomato | plastid | 78.34 | 43.23 |
| PGSC0003DMT400079706 | Potato | cytosol | 78.34 | 43.23 |
| KRH09492 | Soybean | cytosol | 77.62 | 43.09 |
| CDY39258 | Canola | cytosol | 76.17 | 42.71 |
| CDY07474 | Canola | cytosol | 75.81 | 42.51 |
| CDY02710 | Canola | cytosol | 74.73 | 42.07 |
| CDX85460 | Canola | cytosol | 64.62 | 38.25 |
| CDY12173 | Canola | cytosol | 45.49 | 36.42 |
| CDX78740 | Canola | cytosol | 53.07 | 36.39 |
| CDX87975 | Canola | cytosol | 13.36 | 36.27 |
| CDY68511 | Canola | cytosol, mitochondrion | 52.35 | 35.8 |
| CDX70751 | Canola | cytosol, plastid | 79.06 | 34.11 |
| CDY28614 | Canola | cytosol | 48.01 | 33.93 |
| CDY48416 | Canola | cytosol | 7.94 | 9.48 |
| CDY48414 | Canola | cytosol | 7.94 | 9.48 |
| CDX90118 | Canola | plastid | 18.05 | 9.19 |
| CDY11756 | Canola | plastid | 18.05 | 9.19 |
| CDX95824 | Canola | cytosol | 5.05 | 6.33 |
| CDX70758 | Canola | cytosol | 1.08 | 2.54 |
| CDX78746 | Canola | cytosol | 1.08 | 1.96 |
| CDX78742 | Canola | cytosol | 0.36 | 1.05 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.40.640.10 | MapMan:4.1.1.1.3.1 |
| GO:A0A078DY14 | EnsemblPlants:CDX92158 | ProteinID:CDX92158 | ProteinID:CDX92158.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004351 | GO:GO:0005488 | GO:GO:0006536 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016831 | GO:GO:0019752 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00153857001 | InterPro:Glutamate_decarboxylase | InterPro:IPR015421 |
| PFAM:PF00282 | PANTHER:PTHR43321 | PANTHER:PTHR43321:SF8 | MetaCyc:PWY-4321 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major |
| InterPro:PyrdxlP-dep_de-COase | SUPFAM:SSF53383 | TIGRFAMs:TIGR01788 | UniParc:UPI0004EF18AC | : | : |
Description
BnaA05g22490D
Coordinates
chrLK031871:-:550617..552070
Molecular Weight (calculated)
31049.1 Da
IEP (calculated)
4.502
GRAVY (calculated)
-0.143
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLATNSDSE EHLHSTFASR YVRAVVPRFT MPNNSMPKDA AYQVISDELM LDGNPRLNLA SFVTTWMEPE CDKLIQESVN KNYVDMDEYP VTTELQNRCV
101: NMIANLFHAP MGEEEAAIGC GTVGSSEAIM LAGLAFKRKW QQRRRAQGLP TDNPNIVTGA NVQVCWEKFA RYFEVELKEV KLSEGYYVMD PAKAVEMVDE
201: NTICVAAILG STLTGEFEDV KLLNDLLAEK NAETGWDVAI HVDAASGGFI APFLYPDLDY VYIDKRKIVL IPKRSIF
101: NMIANLFHAP MGEEEAAIGC GTVGSSEAIM LAGLAFKRKW QQRRRAQGLP TDNPNIVTGA NVQVCWEKFA RYFEVELKEV KLSEGYYVMD PAKAVEMVDE
201: NTICVAAILG STLTGEFEDV KLLNDLLAEK NAETGWDVAI HVDAASGGFI APFLYPDLDY VYIDKRKIVL IPKRSIF
001: MVLSKTVSES DVSIHSTFAS RYVRNSLPRF EMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNYVDMDEY PVTTELQNRC
101: VNMIARLFNA PLGDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLREDYYVM DPVKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFKIVSKE NGVPLVAFSL KDSSRHNEFE VAHTLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMANGKV NGVKKTPEET QREVTAYWKK LLETKKTNKN TIC
101: VNMIARLFNA PLGDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLREDYYVM DPVKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFKIVSKE NGVPLVAFSL KDSSRHNEFE VAHTLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMANGKV NGVKKTPEET QREVTAYWKK LLETKKTNKN TIC
Arabidopsis Description
GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.