Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48414 | Canola | cytosol | 100.0 | 100.0 |
| Bra032860.1-P | Field mustard | cytosol | 15.09 | 49.3 |
| AT1G27980.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane, plastid | 69.83 | 29.78 |
| CDX90118 | Canola | plastid | 69.4 | 29.6 |
| CDY11756 | Canola | plastid | 68.97 | 29.41 |
| KRH01552 | Soybean | plastid, vacuole | 62.5 | 27.1 |
| KRH70554 | Soybean | endoplasmic reticulum | 62.07 | 26.87 |
| VIT_01s0010g03940.t01 | Wine grape | cytosol, golgi | 62.07 | 26.82 |
| Solyc05g015860.2.1 | Tomato | plastid | 61.21 | 26.39 |
| TraesCS3D01G085400.1 | Wheat | plasma membrane | 59.91 | 25.79 |
| HORVU3Hr1G015150.11 | Barley | cytosol | 59.91 | 25.79 |
| GSMUA_Achr6P06370_001 | Banana | golgi, mitochondrion, plasma membrane, vacuole | 59.05 | 25.56 |
| TraesCS3B01G100600.1 | Wheat | golgi | 59.05 | 25.42 |
| Os01t0100900-01 | Rice | nucleus | 58.62 | 25.23 |
| EES02668 | Sorghum | cytosol | 57.33 | 24.95 |
| TraesCS3A01G085400.2 | Wheat | plasma membrane | 59.48 | 24.91 |
| Zm00001d008389_P003 | Maize | cytosol, mitochondrion, peroxisome, plasma membrane | 59.05 | 24.86 |
| PGSC0003DMT400051021 | Potato | plastid | 53.88 | 22.89 |
| KRH25771 | Soybean | cytosol | 8.62 | 17.24 |
| CDX87977 | Canola | cytosol | 11.21 | 11.4 |
| CDY68511 | Canola | cytosol, mitochondrion | 17.24 | 9.88 |
| CDX78740 | Canola | cytosol | 16.81 | 9.65 |
| CDY28614 | Canola | cytosol | 15.52 | 9.18 |
| CDX92158 | Canola | cytosol | 9.48 | 7.94 |
| CDY16935 | Canola | cytosol | 16.81 | 7.93 |
| CDY46883 | Canola | cytosol | 16.38 | 7.87 |
| CDY12173 | Canola | cytosol | 11.64 | 7.8 |
| CDY02710 | Canola | cytosol | 16.38 | 7.72 |
| CDX95824 | Canola | cytosol | 7.33 | 7.69 |
| CDX78739 | Canola | cytosol, plastid | 16.38 | 7.66 |
| CDY49834 | Canola | cytosol | 15.95 | 7.66 |
| CDY09396 | Canola | cytosol | 15.52 | 7.3 |
| CDY07474 | Canola | cytosol | 15.52 | 7.29 |
| CDY39258 | Canola | cytosol | 15.52 | 7.29 |
| CDY04111 | Canola | cytosol | 15.09 | 7.1 |
| CDY15807 | Canola | cytosol | 15.09 | 7.1 |
| CDY56295 | Canola | cytosol | 15.09 | 7.09 |
| CDX85460 | Canola | cytosol | 12.93 | 6.41 |
| CDX70751 | Canola | cytosol, plastid | 16.81 | 6.07 |
| CDX87975 | Canola | cytosol | 1.72 | 3.92 |
| CDX70758 | Canola | cytosol | 1.72 | 3.39 |
| CDX78742 | Canola | cytosol | 1.29 | 3.16 |
| CDX78746 | Canola | cytosol | 1.29 | 1.96 |
| CDY71197 | Canola | cytosol | 0.43 | 0.96 |
| CDY12174 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY48416 | EnsemblPlantsGene:GSBRNA2T00089438001 | Gene3D:3.40.640.10 | GO:A0A078IG95 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR015421 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major |
| PANTHER:PTHR42735 | PANTHER:PTHR42735:SF6 | ProteinID:CDY48414.1 | ProteinID:CDY48416 | ProteinID:CDY48416.1 | SEG:seg |
| SUPFAM:SSF53383 | TMHMM:TMhelix | UniParc:UPI0004EEFE32 | UniProt:A0A078IG95 | MapMan:35.1 | : |
Description
BnaCnng16290DBnaCnng16270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IG95]
Coordinates
chrLK032772:+:27669..29514
Molecular Weight (calculated)
26338.9 Da
IEP (calculated)
9.504
GRAVY (calculated)
-0.148
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYKKGITRP EMIIPESGHS AYDKAAQYFS IKLWRVPVDK DFIADVKAMT RHVNRNTIIV IFVGSAPGFP HGIIDPIEVD PFFFTTVIFR TFMFSSINLF
101: FFFYQLFKDL PYYLSGRAKI YGLAPKGTST VLYRNHEIRK HQFVAGKYKQ ENYENLNFND GAWAAMMSLG EEASKRLEDG MALECTTETQ QVKANPGPIT
201: GGLAPIYGAA GKMPHRGIMV NDLLVSFMDS RY
101: FFFYQLFKDL PYYLSGRAKI YGLAPKGTST VLYRNHEIRK HQFVAGKYKQ ENYENLNFND GAWAAMMSLG EEASKRLEDG MALECTTETQ QVKANPGPIT
201: GGLAPIYGAA GKMPHRGIMV NDLLVSFMDS RY
001: MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY
Arabidopsis Description
DPL1Sphingosine-1-phosphate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q9C509]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.