Factsheet for HORVU2Hr1G073750.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G295300.2	Wheat	mitochondrion	72.33	87.34
TraesCS2B01G313600.2	Wheat	nucleus	69.62	84.25
TraesCS2A01G297400.1	Wheat	nucleus	69.26	83.62
Os04t0416100-01	Rice	nucleus	35.99	62.38
HORVU0Hr1G038470.7	Barley	mitochondrion, plastid	45.57	55.02
OQU81541	Sorghum	nucleus	41.23	49.89
Zm00001d003755_P001	Maize	nucleus	32.19	48.5
GSMUA_Achr5P17430_001	Banana	plastid	18.44	48.11
GSMUA_Achr6P18220_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.44	47.92
VIT_06s0080g01110.t01	Wine grape	nucleus	37.43	46.41
GSMUA_Achr6P07100_001	Banana	mitochondrion	39.42	45.99
VIT_08s0007g02510.t01	Wine grape	plastid	38.16	45.28
KRH25298	Soybean	nucleus	36.17	44.44
KRH30372	Soybean	nucleus	36.89	44.35
KRH72218	Soybean	nucleus	36.89	43.59
KRH32815	Soybean	nucleus	36.71	43.56
HORVU5Hr1G040190.4	Barley	plastid	36.89	42.24
PGSC0003DMT400042347	Potato	plastid	36.35	42.05
Solyc01g007760.2.1	Tomato	plastid	36.35	41.96
Solyc11g068800.1.1	Tomato	mitochondrion, nucleus	33.45	41.2
PGSC0003DMT400015188	Potato	nucleus	32.91	41.08
CDX84581	Canola	plastid	34.0	40.52
Bra023047.1-P	Field mustard	plastid	34.36	40.51
CDX98588	Canola	nucleus	32.19	40.18
PGSC0003DMT400050512	Potato	mitochondrion, nucleus	32.73	39.96
CDX92373	Canola	nucleus	32.01	39.95
Bra017268.1-P	Field mustard	plastid	34.9	39.63
Bra002398.1-P	Field mustard	nucleus	31.65	39.5
CDY43755	Canola	plastid	34.72	39.26
CDX70990	Canola	nucleus	32.37	39.0
CDX84164	Canola	plastid	33.82	38.8
Bra005305.1-P	Field mustard	plastid	33.63	38.67
Bra006615.1-P	Field mustard	nucleus	32.37	38.66
AT5G22220.2	Thale cress	cytosol	32.73	38.59
CDX88807	Canola	cytosol	32.37	37.06
CDX75078	Canola	plastid	34.18	35.39
CDX79651	Canola	plastid	32.55	34.68
AT2G36010.2	Thale cress	plastid	31.83	34.24
KRH26172	Soybean	nucleus	10.13	29.79
PGSC0003DMT400013986	Potato	cytosol	4.7	26.53
HORVU2Hr1G004820.2	Barley	cytosol	5.61	24.8
Solyc06g074010.2.1	Tomato	nucleus	32.73	21.37

Protein Annotations

Gene3D:1.10.10.10	MapMan:13.1.2.2	MapMan:15.5.10	UniProt:A0A287IG33	ncoils:Coil	InterPro:E2F
InterPro:E2F-DP_heterodim	InterPro:E2F_CC-MB	InterPro:E2F_WHTH_DNA-bd_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005667	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046983	EnsemblPlantsGene:HORVU2Hr1G073750	EnsemblPlants:HORVU2Hr1G073750.2
InterPro:IPR036388	PFAM:PF02319	PFAM:PF16421	PANTHER:PTHR12081	PANTHER:PTHR12081:SF45	SMART:SM01372
SUPFAM:SSF144074	SUPFAM:SSF46785	UniParc:UPI000B489029	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:532195222..532201503

Molecular Weight (calculated)

59638.4 Da

IEP (calculated)

5.314

GRAVY (calculated)

-0.441

Length

553 amino acids

Sequence
(BLAST)

001: QPSLSASLLI TYPKSQLANA TNFPPFPRFF SLSSRFSPLN PSHRPVPLPA ADLAGTLPKE PASGRSPEIR PGPGSLRAGP VIAGFGGAAA LLSETMSGGG
101: RPQAAQQIVQ SVQKCVPLDP ERPPFAVPDE YHQFPLPPSS SAAAAASRGS AGGDVEEGIV IRTPLKRKAP SGENDAIEST EWIITNPGFT EGVSSPHMTP
201: VSGKAARTYK SKAKGSNDGL QTPISNAGSP GTPFTPGSSR AEHSLGELTK KFISLLKQAE DGILDLNNVA EILVVKKRRI YDITNVLEGI GLLEKKLKNR
301: IRWRGLDDSG TNLDNEISVL ETELEDLGLQ EKALDKRISE MQEKVRELTE EENNKRWLYL TEDDIKGLPC FQNETLIAIK APHGTTLEVP DPDEAGDYTQ
401: RRYTIVIRSA MGSIDLYLVS KFEENMEELV GVATPPRHAN VAGPASTDRF IATEAGQSSR SKDKLPNIQH IHRTPDLNAQ EFGGMAKITP VFDVDADYFL
501: LTDGDGSSIT DMWRTAPEVQ WDQLLAEEAT APRTPKRQPA VVGKSTAVGP TCG

Best Arabidopsis Sequence Match ( AT2G36010.1 )
(BLAST)

001: MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPSRKRKATM
101: DMVVAPSNNG FTSSGFTNIP SSPCQTPRKG GRVNIKSKAK GNKSTPQTPI STNAGSPITL TPSGSCRYDS SLGLLTKKFV NLIKQAKDGM LDLNKAAETL
201: EVQKRRIYDI TNVLEGIDLI EKPFKNRILW KGVDACPGDE DADVSVLQAE IENLALEEQA LDNQIRQTEE RLRDLSENEK NQKWLFVTEE DIKSLPGFQN
301: QTLIAVKAPH GTTLEVPDPD EAADHPQRRY RIILRSTMGP IDVYLVSEFE GKFEDTNGSG AAPPACLPIA SSSGSTGHHD IEALTVDNPE TAIVSHDHPH
401: PQPGDTSDLN YLQEQVGGML KITPSDVEND ESDYWLLSNA EISMTDIWKT DSGIDWDYGI ADVSTPPPGM GEIAPTAVDS TPR

Arabidopsis Description

E2F3E2F transcription factor 3 [Source:UniProtKB/TrEMBL;Acc:F4ILT1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.