Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84581 Canola plastid 62.06 68.75
Bra023047.1-P Field mustard plastid 61.87 67.8
Bra005305.1-P Field mustard plastid 63.23 67.57
CDX84164 Canola plastid 63.23 67.43
Bra017268.1-P Field mustard plastid 63.03 66.53
CDY43755 Canola plastid 61.67 64.83
CDX75078 Canola plastid 64.79 62.36
CDX79651 Canola plastid 60.89 60.31
VIT_08s0007g02510.t01 Wine grape plastid 48.25 53.22
KRH32815 Soybean nucleus 45.33 50.0
KRH72218 Soybean nucleus 45.14 49.57
Solyc01g007760.2.1 Tomato plastid 45.72 49.06
PGSC0003DMT400042347 Potato plastid 45.53 48.95
Os04t0416100-01 Rice nucleus 29.18 47.02
GSMUA_Achr5P17430_001 Banana plastid 18.68 45.28
OQU78759 Sorghum plastid 33.27 45.24
GSMUA_Achr6P18220_001 Banana endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 35.8 44.99
GSMUA_Achr6P07100_001 Banana mitochondrion 41.44 44.94
TraesCS6B01G233700.2 Wheat mitochondrion, plastid 39.88 44.76
TraesCS6D01G182600.1 Wheat mitochondrion, plastid 39.69 44.54
TraesCS6A01G195500.2 Wheat mitochondrion, plastid 39.69 44.54
HORVU0Hr1G038470.7 Barley mitochondrion, plastid 39.49 44.32
GSMUA_Achr2P20420_001 Banana nucleus 35.8 44.02
Os02t0537500-01 Rice mitochondrion 40.27 43.58
TraesCS5B01G125100.1 Wheat cytosol 37.55 43.47
TraesCS5D01G133600.1 Wheat cytosol 37.35 43.24
TraesCS5A01G125900.3 Wheat cytosol 37.35 43.24
Zm00001d050664_P002 Maize mitochondrion, plastid 31.91 43.16
Os12t0158800-01 Rice nucleus 37.16 42.83
GSMUA_Achr10P... Banana nucleus, plastid 36.58 42.73
Zm00001d016737_P002 Maize mitochondrion, plastid 37.55 41.42
AT5G22220.2 Thale cress cytosol 37.55 41.15
Zm00001d023465_P002 Maize cytosol 36.19 40.88
TraesCS2B01G313600.2 Wheat nucleus 35.8 40.26
TraesCS2D01G295300.2 Wheat mitochondrion 35.41 39.74
TraesCS2A01G297400.1 Wheat nucleus 35.41 39.74
HORVU5Hr1G040190.4 Barley plastid 36.97 39.34
OQU85083 Sorghum mitochondrion, plastid 35.02 38.22
OQU81541 Sorghum nucleus 33.27 37.42
Zm00001d003755_P001 Maize nucleus 26.46 37.06
HORVU2Hr1G073750.2 Barley plastid 34.24 31.83
AT1G47870.1 Thale cress nucleus, plastid 24.51 31.82
Protein Annotations
Gene3D:1.10.10.10MapMan:13.1.2.2MapMan:15.5.10EntrezGene:818174ProteinID:AEC09193.1ArrayExpress:AT2G36010
EnsemblPlantsGene:AT2G36010RefSeq:AT2G36010TAIR:AT2G36010RefSeq:AT2G36010-TAIR-GEnsemblPlants:AT2G36010.2TAIR:AT2G36010.2
ncoils:CoilInterPro:E2FInterPro:E2F-DP_heterodimSymbol:E2F3InterPro:E2F_CC-MBInterPro:E2F_WHTH_DNA-bd_dom
UniProt:F4ILT1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005667
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0046983InterPro:IPR036388RefSeq:NP_973610.1PFAM:PF02319PFAM:PF16421
PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PANTHER:PTHR12081PANTHER:PTHR12081:SF72SMART:SM01372SUPFAM:SSF144074SUPFAM:SSF46785
UniParc:UPI00000A09FEInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg::
Description
E2F3E2F transcription factor 3 [Source:UniProtKB/TrEMBL;Acc:F4ILT1]
Coordinates
chr2:+:15119589..15123184
Molecular Weight (calculated)
56424.6 Da
IEP (calculated)
5.339
GRAVY (calculated)
-0.383
Length
514 amino acids
Sequence
(BLAST)
001: MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPIFPSEIGL
101: EIRGCFGDFD CYLLLLSLIQ KLRSVRLSSI RVNFCRLFSF AMSRKRKATM DMVVAPSNNG FTSSGFTNIP SSPCQTPRKG GRVNIKSKAK GNKSTPQTPI
201: STNAVRSFYE ISFMSRVTSL LTKKFVNLIK QAKDGMLDLN KAAETLEVQK RRIYDITNVL EGIDLIEKPF KNRILWKGVD ACPGDEDADV SVLQLQAEIE
301: NLALEEQALD NQIRWLFVTE EDIKSLPGFQ NQTLIAVKAP HGTTLEVPDP DEAADHPQRR YRIILRSTMG PIDVYLVSEF EGKFEDTNGS GAAPPACLPI
401: ASSSGSTGHH DIEALTVDNP ETAIVSHDHP HPQPGDTSDL NYLQEQVGGM LKITPSDVEN DESDYWLLSN AEISMTDIWK TDSGIDWDYG IADVSTPPPG
501: MGEIAPTAVD STPR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.