Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G125900.3 Wheat cytosol 98.42 98.42
TraesCS5B01G125100.1 Wheat cytosol 98.2 98.2
HORVU5Hr1G040190.4 Barley plastid 93.69 86.13
Os12t0158800-01 Rice nucleus 83.78 83.41
OQU78759 Sorghum plastid 69.37 81.48
Zm00001d023465_P002 Maize cytosol 79.73 77.8
GSMUA_Achr5P17430_001 Banana plastid 29.05 60.85
GSMUA_Achr6P18220_001 Banana endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 51.13 55.5
VIT_08s0007g02510.t01 Wine grape plastid 57.88 55.15
GSMUA_Achr6P07100_001 Banana mitochondrion 57.88 54.22
VIT_06s0080g01110.t01 Wine grape nucleus 52.93 52.69
PGSC0003DMT400042347 Potato plastid 55.41 51.46
KRH72218 Soybean nucleus 54.05 51.28
Solyc11g068800.1.1 Tomato mitochondrion, nucleus 51.8 51.22
Solyc01g007760.2.1 Tomato plastid 55.18 51.15
KRH32815 Soybean nucleus 53.38 50.86
TraesCS6D01G182600.1 Wheat mitochondrion, plastid 51.13 49.56
PGSC0003DMT400050512 Potato mitochondrion, nucleus 50.23 49.23
PGSC0003DMT400015188 Potato nucleus 49.1 49.21
KRH30372 Soybean nucleus 50.68 48.91
KRH25298 Soybean nucleus 49.32 48.67
CDX84581 Canola plastid 47.75 45.69
Bra023047.1-P Field mustard plastid 47.75 45.2
TraesCS2D01G295300.2 Wheat mitochondrion 46.17 44.76
CDX84164 Canola plastid 48.2 44.4
Bra017268.1-P Field mustard plastid 48.42 44.15
Bra005305.1-P Field mustard plastid 47.75 44.07
CDY43755 Canola plastid 47.97 43.56
CDX92373 Canola nucleus 41.67 41.76
CDX98588 Canola nucleus 41.67 41.76
Bra002398.1-P Field mustard nucleus 41.44 41.53
CDX70990 Canola nucleus 42.12 40.74
AT5G22220.2 Thale cress cytosol 43.02 40.72
Bra006615.1-P Field mustard nucleus 42.34 40.6
CDX75078 Canola plastid 48.2 40.07
CDX79651 Canola plastid 46.17 39.5
CDX88807 Canola cytosol 42.34 38.92
AT2G36010.2 Thale cress plastid 43.24 37.35
PGSC0003DMT400013986 Potato cytosol 7.43 33.67
KRH26172 Soybean nucleus 13.29 31.38
TraesCS2D01G031400.1 Wheat plastid 31.08 30.07
Solyc06g074010.2.1 Tomato nucleus 48.87 25.62
Protein Annotations
Gene3D:1.10.10.10MapMan:13.1.2.2MapMan:15.5.10ncoils:CoilInterPro:E2FInterPro:E2F-DP_heterodim
InterPro:E2F_CC-MBInterPro:E2F_WHTH_DNA-bd_domGO:GO:0003674GO:GO:0003700GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005667GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0046983InterPro:IPR036388
PFAM:PF02319PFAM:PF16421PANTHER:PTHR12081PANTHER:PTHR12081:SF48SMART:SM01372SUPFAM:SSF144074
SUPFAM:SSF46785EnsemblPlantsGene:TraesCS5D01G133600EnsemblPlants:TraesCS5D01G133600.1InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfTIGR:cd14660
SEG:seg:::::
Description
No Description!
Coordinates
chr5D:+:213320435..213324753
Molecular Weight (calculated)
48675.3 Da
IEP (calculated)
4.464
GRAVY (calculated)
-0.603
Length
444 amino acids
Sequence
(BLAST)
001: MAAAAGGTSS EGAARVLLQR YQPFGSPPGD YHHFGPADGG GSAEMTEAVV LRTPLKRKHN REDNEVTESN DWMMSPGYAN ATNSPIPTPP SGKGSKMSAK
101: PKAAKGQKSC PQTPLFSGSP GNPATPVGGC RYDSSLGLLT KKFLNLLKGA PGGMVDLNNA AETLEVQKRR IYDITNVLEG IGLIEKKLKN NIRWKGIDDS
201: RPGEVSDDMS ILQGDIEALT LQEHSLDGQI SEMRDKLREL TEDENNQKWL YVTEHDIKSL PCFQNQTLIA IKAPHGTTLE VPDPDEVNDY PQRRYRIVLR
301: STMGPIDVYL VSQFEEMSGM ETPPRSAQTI SMDYLENPRT PLATGSNKDV EMENVQQGLI MPPDAPTTQD IGGMMKIVPS ELDTDADYWL LSDTGVSITD
401: MWKTAPDVEW EGIDINAEDF LEVGTPRQQD QPPSEMVDHP SCIS
Best Arabidopsis Sequence Match ( AT2G36010.1 )
(BLAST)
001: MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPSRKRKATM
101: DMVVAPSNNG FTSSGFTNIP SSPCQTPRKG GRVNIKSKAK GNKSTPQTPI STNAGSPITL TPSGSCRYDS SLGLLTKKFV NLIKQAKDGM LDLNKAAETL
201: EVQKRRIYDI TNVLEGIDLI EKPFKNRILW KGVDACPGDE DADVSVLQAE IENLALEEQA LDNQIRQTEE RLRDLSENEK NQKWLFVTEE DIKSLPGFQN
301: QTLIAVKAPH GTTLEVPDPD EAADHPQRRY RIILRSTMGP IDVYLVSEFE GKFEDTNGSG AAPPACLPIA SSSGSTGHHD IEALTVDNPE TAIVSHDHPH
401: PQPGDTSDLN YLQEQVGGML KITPSDVEND ESDYWLLSNA EISMTDIWKT DSGIDWDYGI ADVSTPPPGM GEIAPTAVDS TPR
Arabidopsis Description
E2F3E2F transcription factor 3 [Source:UniProtKB/TrEMBL;Acc:F4ILT1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.