CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72218	Soybean	nucleus	50.0	20.09
KRH32815	Soybean	nucleus	48.4	19.53
GSMUA_Achr5P17430_001	Banana	plastid	21.28	18.87
GSMUA_Achr6P18220_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.64	16.38
KRH07603	Soybean	cytosol	15.96	15.87
KRH25298	Soybean	nucleus	37.23	15.56
KRH30372	Soybean	nucleus	37.77	15.43
OQU78759	Sorghum	plastid	30.32	15.08
GSMUA_Achr6P07100_001	Banana	mitochondrion	37.77	14.98
GSMUA_Achr2P20420_001	Banana	nucleus	32.98	14.83
Zm00001d050664_P002	Maize	mitochondrion, plastid	29.79	14.74
Os04t0416100-01	Rice	nucleus	25.0	14.73
GSMUA_Achr10P...	Banana	nucleus, plastid	34.04	14.55
Zm00001d003755_P001	Maize	nucleus	28.19	14.44
Os12t0158800-01	Rice	nucleus	32.98	13.9
Os02t0537500-01	Rice	mitochondrion	34.57	13.68
KRH61047	Soybean	cytosol, nucleus, plastid	25.53	13.52
TraesCS5B01G125100.1	Wheat	cytosol	31.91	13.51
TraesCS5A01G125900.3	Wheat	cytosol	31.91	13.51
HORVU0Hr1G038470.7	Barley	mitochondrion, plastid	32.45	13.32
TraesCS6D01G182600.1	Wheat	mitochondrion, plastid	32.45	13.32
TraesCS6B01G233700.2	Wheat	mitochondrion, plastid	32.45	13.32
TraesCS6A01G195500.2	Wheat	mitochondrion, plastid	32.45	13.32
TraesCS5D01G133600.1	Wheat	cytosol	31.38	13.29
Zm00001d016737_P002	Maize	mitochondrion, plastid	32.45	13.09
TraesCS2B01G313600.2	Wheat	nucleus	30.85	12.69
TraesCS2D01G295300.2	Wheat	mitochondrion	30.85	12.66
TraesCS2A01G297400.1	Wheat	nucleus	30.85	12.66
HORVU5Hr1G040190.4	Barley	plastid	31.91	12.42
Zm00001d023465_P002	Maize	cytosol	29.79	12.31
OQU81541	Sorghum	nucleus	29.79	12.25
PGSC0003DMT400013986	Potato	cytosol	6.38	12.24
OQU85083	Sorghum	mitochondrion, plastid	27.66	11.04
KRH51709	Soybean	nucleus	23.4	10.33
HORVU2Hr1G073750.2	Barley	plastid	29.79	10.13

Protein Annotations

MapMan:13.1.2.2	UniProt:A0A0R0H5R9	EMBL:ACUP02007569	InterPro:E2F	InterPro:E2F-DP_heterodim	InterPro:E2F_CC-MB
EnsemblPlantsGene:GLYMA_12G156700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	EnsemblPlants:KRH26172
ProteinID:KRH26172	ProteinID:KRH26172.1	PFAM:PF16421	PANTHER:PTHR12081	PANTHER:PTHR12081:SF72	SUPFAM:SSF144074
UniParc:UPI0006EDB391	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:25335930..25338449

Molecular Weight (calculated)

21364.3 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.743

Length

188 amino acids

Sequence
(BLAST)

001: MDTTITQLSP SCNTAVEPPR RSVHQRLVQS TFFPHKPPEP IEKNEIEDER DEDYSNTENH KKRKRPKAEV EKLSSEEQGL DDQIRPVHFC KLNETLIAIK
101: ALHGTTLEVP NPEEAVDHRE RRYKIILRST MGPLIQFEEV SGADLPMIPL ASSFGSIEQL MTEMVPTKCS GKELEPQTQL SSQAFSDL

Best Arabidopsis Sequence Match ( AT2G36010.2 )
(BLAST)

001: MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPIFPSEIGL
101: EIRGCFGDFD CYLLLLSLIQ KLRSVRLSSI RVNFCRLFSF AMSRKRKATM DMVVAPSNNG FTSSGFTNIP SSPCQTPRKG GRVNIKSKAK GNKSTPQTPI
201: STNAVRSFYE ISFMSRVTSL LTKKFVNLIK QAKDGMLDLN KAAETLEVQK RRIYDITNVL EGIDLIEKPF KNRILWKGVD ACPGDEDADV SVLQLQAEIE
301: NLALEEQALD NQIRWLFVTE EDIKSLPGFQ NQTLIAVKAP HGTTLEVPDP DEAADHPQRR YRIILRSTMG PIDVYLVSEF EGKFEDTNGS GAAPPACLPI
401: ASSSGSTGHH DIEALTVDNP ETAIVSHDHP HPQPGDTSDL NYLQEQVGGM LKITPSDVEN DESDYWLLSN AEISMTDIWK TDSGIDWDYG IADVSTPPPG
501: MGEIAPTAVD STPR

Arabidopsis Description

E2F3E2F transcription factor 3 [Source:UniProtKB/TrEMBL;Acc:F4ILT1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.