Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P17430_001 | Banana | plastid | 22.45 | 10.38 |
| OQU78759 | Sorghum | plastid | 33.67 | 8.73 |
| PGSC0003DMT400050512 | Potato | mitochondrion, nucleus | 38.78 | 8.39 |
| PGSC0003DMT400042347 | Potato | plastid | 40.82 | 8.37 |
| Os04t0416100-01 | Rice | nucleus | 26.53 | 8.15 |
| Zm00001d003755_P001 | Maize | nucleus | 29.59 | 7.9 |
| GSMUA_Achr2P20420_001 | Banana | nucleus | 33.67 | 7.89 |
| Zm00001d023465_P002 | Maize | cytosol | 35.71 | 7.69 |
| TraesCS5D01G133600.1 | Wheat | cytosol | 33.67 | 7.43 |
| TraesCS5B01G125100.1 | Wheat | cytosol | 33.67 | 7.43 |
| TraesCS5A01G125900.3 | Wheat | cytosol | 33.67 | 7.43 |
| Zm00001d050664_P002 | Maize | mitochondrion, plastid | 28.57 | 7.37 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 32.65 | 7.27 |
| PGSC0003DMT400015188 | Potato | nucleus | 32.65 | 7.22 |
| TraesCS6B01G233700.2 | Wheat | mitochondrion, plastid | 33.67 | 7.21 |
| GSMUA_Achr6P18220_001 | Banana | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.59 | 7.09 |
| TraesCS6D01G182600.1 | Wheat | mitochondrion, plastid | 32.65 | 6.99 |
| TraesCS6A01G195500.2 | Wheat | mitochondrion, plastid | 32.65 | 6.99 |
| HORVU0Hr1G038470.7 | Barley | mitochondrion, plastid | 32.65 | 6.99 |
| Os12t0158800-01 | Rice | nucleus | 31.63 | 6.95 |
| GSMUA_Achr6P07100_001 | Banana | mitochondrion | 31.63 | 6.54 |
| HORVU5Hr1G040190.4 | Barley | plastid | 31.63 | 6.42 |
| KRH26172 | Soybean | nucleus | 12.24 | 6.38 |
| Os02t0537500-01 | Rice | mitochondrion | 30.61 | 6.32 |
| Zm00001d016737_P002 | Maize | mitochondrion, plastid | 28.57 | 6.01 |
| PGSC0003DMT400009682 | Potato | plastid | 23.47 | 5.75 |
| OQU85083 | Sorghum | mitochondrion, plastid | 27.55 | 5.73 |
| TraesCS2B01G313600.2 | Wheat | nucleus | 26.53 | 5.69 |
| OQU81541 | Sorghum | nucleus | 26.53 | 5.69 |
| TraesCS2D01G295300.2 | Wheat | mitochondrion | 26.53 | 5.68 |
| TraesCS2A01G297400.1 | Wheat | nucleus | 26.53 | 5.68 |
| HORVU2Hr1G073750.2 | Barley | plastid | 26.53 | 4.7 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400013986 | EnsemblPlantsGene:PGSC0003DMG401005482 | InterPro:E2F | InterPro:E2F-DP_heterodim | PANTHER:PTHR12081 | PANTHER:PTHR12081:SF72 |
| PGSC:PGSC0003DMG401005482 | SUPFAM:SSF144074 | UniParc:UPI00029505FC | UniProt:M1A3L4 | MapMan:35.2 | : |
Description
E2F4,5 [Source:PGSC_GENE;Acc:PGSC0003DMG401005482]
Coordinates
chr7:+:11792599..11797949
Molecular Weight (calculated)
11114.4 Da
IEP (calculated)
4.346
GRAVY (calculated)
0.002
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MQEKLRDMSE DENNQRWLFV TEEDIKSLPC FQVFDAMEQV CIWNAMVSSL ALTMNSGLQP NEIVFVAVLS ACVRVPSLSI SGSNCLKQCH MNSDLQLR
001: MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPSRKRKATM
101: DMVVAPSNNG FTSSGFTNIP SSPCQTPRKG GRVNIKSKAK GNKSTPQTPI STNAGSPITL TPSGSCRYDS SLGLLTKKFV NLIKQAKDGM LDLNKAAETL
201: EVQKRRIYDI TNVLEGIDLI EKPFKNRILW KGVDACPGDE DADVSVLQAE IENLALEEQA LDNQIRQTEE RLRDLSENEK NQKWLFVTEE DIKSLPGFQN
301: QTLIAVKAPH GTTLEVPDPD EAADHPQRRY RIILRSTMGP IDVYLVSEFE GKFEDTNGSG AAPPACLPIA SSSGSTGHHD IEALTVDNPE TAIVSHDHPH
401: PQPGDTSDLN YLQEQVGGML KITPSDVEND ESDYWLLSNA EISMTDIWKT DSGIDWDYGI ADVSTPPPGM GEIAPTAVDS TPR
101: DMVVAPSNNG FTSSGFTNIP SSPCQTPRKG GRVNIKSKAK GNKSTPQTPI STNAGSPITL TPSGSCRYDS SLGLLTKKFV NLIKQAKDGM LDLNKAAETL
201: EVQKRRIYDI TNVLEGIDLI EKPFKNRILW KGVDACPGDE DADVSVLQAE IENLALEEQA LDNQIRQTEE RLRDLSENEK NQKWLFVTEE DIKSLPGFQN
301: QTLIAVKAPH GTTLEVPDPD EAADHPQRRY RIILRSTMGP IDVYLVSEFE GKFEDTNGSG AAPPACLPIA SSSGSTGHHD IEALTVDNPE TAIVSHDHPH
401: PQPGDTSDLN YLQEQVGGML KITPSDVEND ESDYWLLSNA EISMTDIWKT DSGIDWDYGI ADVSTPPPGM GEIAPTAVDS TPR
Arabidopsis Description
E2F3E2F transcription factor 3 [Source:UniProtKB/TrEMBL;Acc:F4ILT1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.