Factsheet for Os12t0158800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G125900.3	Wheat	cytosol	84.08	84.46
TraesCS5B01G125100.1	Wheat	cytosol	84.08	84.46
TraesCS5D01G133600.1	Wheat	cytosol	83.41	83.78
OQU78759	Sorghum	plastid	69.28	81.75
Zm00001d023465_P002	Maize	cytosol	80.04	78.46
HORVU5Hr1G040190.4	Barley	plastid	82.06	75.78
GSMUA_Achr5P17430_001	Banana	plastid	28.92	60.85
GSMUA_Achr6P18220_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.57	56.23
GSMUA_Achr6P07100_001	Banana	mitochondrion	59.42	55.91
VIT_08s0007g02510.t01	Wine grape	plastid	57.85	55.36
Os04t0416100-01	Rice	nucleus	38.34	53.6
VIT_06s0080g01110.t01	Wine grape	nucleus	53.59	53.59
KRH72218	Soybean	nucleus	55.83	53.21
KRH32815	Soybean	nucleus	54.71	52.36
PGSC0003DMT400042347	Potato	plastid	54.93	51.26
Os02t0537500-01	Rice	mitochondrion	54.48	51.16
Solyc01g007760.2.1	Tomato	plastid	54.48	50.73
Solyc11g068800.1.1	Tomato	mitochondrion, nucleus	50.0	49.67
KRH25298	Soybean	nucleus	49.78	49.33
KRH30372	Soybean	nucleus	50.67	49.13
PGSC0003DMT400050512	Potato	mitochondrion, nucleus	48.88	48.12
PGSC0003DMT400015188	Potato	nucleus	47.76	48.08
CDX84581	Canola	plastid	46.86	45.04
Bra023047.1-P	Field mustard	plastid	46.86	44.56
CDX84164	Canola	plastid	47.98	44.4
Bra017268.1-P	Field mustard	plastid	48.21	44.15
Bra005305.1-P	Field mustard	plastid	47.53	44.07
CDX98588	Canola	nucleus	43.5	43.79
CDX92373	Canola	nucleus	43.5	43.79
Bra002398.1-P	Field mustard	nucleus	43.27	43.57
CDY43755	Canola	plastid	47.53	43.35
CDX70990	Canola	nucleus	43.95	42.7
AT5G22220.2	Thale cress	cytosol	44.17	42.0
Bra006615.1-P	Field mustard	nucleus	43.5	41.9
CDX88807	Canola	cytosol	43.5	40.17
CDX75078	Canola	plastid	47.98	40.07
CDX79651	Canola	plastid	45.74	39.31
AT2G36010.2	Thale cress	plastid	42.83	37.16
KRH26172	Soybean	nucleus	13.9	32.98
Os04t0112200-00	Rice	nucleus, plastid	34.08	31.67
PGSC0003DMT400013986	Potato	cytosol	6.95	31.63
Solyc06g074010.2.1	Tomato	nucleus	47.53	25.03

Protein Annotations

Gene3D:1.10.10.10	MapMan:13.1.2.2	MapMan:15.5.10	EntrezGene:4351555	ProteinID:ABA96515.1	ProteinID:BAF29225.1
ProteinID:BAT15972.1	InterPro:E2F	InterPro:E2F-DP_heterodim	InterPro:E2F_CC-MB	InterPro:E2F_WHTH_DNA-bd_dom	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005667	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046983
InterPro:IPR036388	EnsemblPlantsGene:Os12g0158800	EnsemblPlants:Os12t0158800-01	PFAM:PF02319	PFAM:PF16421	PANTHER:PTHR12081
PANTHER:PTHR12081:SF48	UniProt:Q2QXF8	SMART:SM01372	SUPFAM:SSF144074	SUPFAM:SSF46785	UniParc:UPI00006819EA
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015620749.1	SEG:seg	:	:

Description

E2F transcription factor 2Similar to E2F homolog (Fragment). (Os12t0158800-01)

Coordinates

chr12:-:2939741..2945064

Molecular Weight (calculated)

48584.2 Da

IEP (calculated)

4.409

GRAVY (calculated)

-0.533

Length

446 amino acids

Sequence
(BLAST)

001: MAAAGAGSSE VAARVLLQRY QPFAPPPGEY HQFGSGGAAA AGDMTEAVLI RTPLKRKHDR EENEAAESND WMMSPGYTNP AGSPVPTPLS GKGSKAFAKS
101: KAAKGQKSCP QTPLCASSPG NPVTPVGGCR YDSSLGLLTK KFLNLLKGAP GGIVDLNNAA ETLEVQKRRI YDITNVLEGI GLIEKKLKNN IRWKGIDDSR
201: PGEVSDDMSI LQADIEALSL QEHSVDQQIS EMRDKLRGLT EDENNQKWLY VTEDDIKSLP CFQNQTLIAI KAPHGTTLEV PDPDEVNDYP QRRYRIVLRS
301: TMGPIDVYLV SQFEEMSGME TPPRTVQPVS MDSLENPRTP LAAEPNKAAE SQPNIQDGLL MPSDAPSSSQ DIGGMMKIVP SELDTDADYW LLSDAGVSIT
401: DMWKTAPEVE WEGIEKFNAE DFLEVSTPRQ QDKPSSDIMD GDSCIS

Best Arabidopsis Sequence Match ( AT2G36010.1 )
(BLAST)

001: MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPSRKRKATM
101: DMVVAPSNNG FTSSGFTNIP SSPCQTPRKG GRVNIKSKAK GNKSTPQTPI STNAGSPITL TPSGSCRYDS SLGLLTKKFV NLIKQAKDGM LDLNKAAETL
201: EVQKRRIYDI TNVLEGIDLI EKPFKNRILW KGVDACPGDE DADVSVLQAE IENLALEEQA LDNQIRQTEE RLRDLSENEK NQKWLFVTEE DIKSLPGFQN
301: QTLIAVKAPH GTTLEVPDPD EAADHPQRRY RIILRSTMGP IDVYLVSEFE GKFEDTNGSG AAPPACLPIA SSSGSTGHHD IEALTVDNPE TAIVSHDHPH
401: PQPGDTSDLN YLQEQVGGML KITPSDVEND ESDYWLLSNA EISMTDIWKT DSGIDWDYGI ADVSTPPPGM GEIAPTAVDS TPR

Arabidopsis Description

E2F3E2F transcription factor 3 [Source:UniProtKB/TrEMBL;Acc:F4ILT1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.