Factsheet for AT5G22220.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92373	Canola	nucleus	78.04	82.62
CDX98588	Canola	nucleus	78.04	82.62
Bra002398.1-P	Field mustard	nucleus	77.61	82.17
CDX70990	Canola	nucleus	77.61	79.3
Bra006615.1-P	Field mustard	nucleus	77.4	78.4
CDX88807	Canola	cytosol	77.83	75.57
KRH25298	Soybean	nucleus	53.52	55.78
Solyc11g068800.1.1	Tomato	mitochondrion, nucleus	53.3	55.68
VIT_06s0080g01110.t01	Wine grape	nucleus	52.24	54.93
GSMUA_Achr5P17430_001	Banana	plastid	24.73	54.72
KRH30372	Soybean	nucleus	53.52	54.57
PGSC0003DMT400015188	Potato	nucleus	50.96	53.95
PGSC0003DMT400050512	Potato	mitochondrion, nucleus	51.39	53.2
GSMUA_Achr6P18220_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.28	49.63
Os04t0416100-01	Rice	nucleus	33.69	49.53
GSMUA_Achr10P...	Banana	nucleus, plastid	44.78	47.73
GSMUA_Achr2P20420_001	Banana	nucleus	42.22	47.37
GSMUA_Achr6P07100_001	Banana	mitochondrion	47.12	46.62
OQU78759	Sorghum	plastid	37.53	46.56
Zm00001d050664_P002	Maize	mitochondrion, plastid	36.89	45.53
HORVU0Hr1G038470.7	Barley	mitochondrion, plastid	44.35	45.41
TraesCS6B01G233700.2	Wheat	mitochondrion, plastid	43.92	44.98
TraesCS6A01G195500.2	Wheat	mitochondrion, plastid	43.92	44.98
TraesCS6D01G182600.1	Wheat	mitochondrion, plastid	43.92	44.98
Os12t0158800-01	Rice	nucleus	42.0	44.17
TraesCS5B01G125100.1	Wheat	cytosol	41.15	43.47
TraesCS5A01G125900.3	Wheat	cytosol	40.94	43.24
Os02t0537500-01	Rice	mitochondrion	43.71	43.16
TraesCS5D01G133600.1	Wheat	cytosol	40.72	43.02
Zm00001d016737_P002	Maize	mitochondrion, plastid	41.79	42.06
Zm00001d023465_P002	Maize	cytosol	40.72	41.98
OQU85083	Sorghum	mitochondrion, plastid	40.09	39.92
TraesCS2D01G295300.2	Wheat	mitochondrion	38.81	39.74
OQU81541	Sorghum	nucleus	38.59	39.61
Zm00001d003755_P001	Maize	nucleus	30.7	39.24
TraesCS2B01G313600.2	Wheat	nucleus	38.17	39.17
HORVU5Hr1G040190.4	Barley	plastid	40.3	39.13
TraesCS2A01G297400.1	Wheat	nucleus	38.17	39.08
AT2G36010.2	Thale cress	plastid	41.15	37.55
AT1G47870.1	Thale cress	nucleus, plastid	31.34	37.12
HORVU2Hr1G073750.2	Barley	plastid	38.59	32.73
Solyc06g074010.2.1	Tomato	nucleus	50.53	27.98

Protein Annotations

Gene3D:1.10.10.10	MapMan:13.1.2.2	MapMan:15.5.10	EntrezGene:832283	UniProt:A0A178ULG8	ProteinID:AED92998.1
ProteinID:AED92999.1	EMBL:AF242580	EMBL:AJ294533	ArrayExpress:AT5G22220	EnsemblPlantsGene:AT5G22220	RefSeq:AT5G22220
TAIR:AT5G22220	RefSeq:AT5G22220-TAIR-G	EnsemblPlants:AT5G22220.2	TAIR:AT5G22220.2	EMBL:AY136479	Unigene:At.10189
ProteinID:BAB17029.1	EMBL:BT006610	ProteinID:CAC34515.1	ncoils:Coil	InterPro:E2F	InterPro:E2F-DP_heterodim
Symbol:E2F1	InterPro:E2F_CC-MB	InterPro:E2F_WHTH_DNA-bd_dom	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005667	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0008284	GO:GO:0009058
GO:GO:0009653	GO:GO:0009719	GO:GO:0009733	GO:GO:0009987	GO:GO:0010090	GO:GO:0016043
GO:GO:0030154	GO:GO:0045893	GO:GO:0046983	GO:GO:0051302	GO:GO:0051446	InterPro:IPR036388
RefSeq:NP_001031921.3	RefSeq:NP_568413.1	ProteinID:OAO93924.1	PFAM:PF02319	PFAM:PF16421	PO:PO:0000013
PO:PO:0000016	PO:PO:0000017	PO:PO:0000035	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000232	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0006504	PO:PO:0007095	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0009062	PO:PO:0009066
PO:PO:0009072	PO:PO:0009073	PO:PO:0009074	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0020148	PO:PO:0025022	PO:PO:0025257	PO:PO:0025281	PANTHER:PTHR12081
PANTHER:PTHR12081:SF72	UniProt:Q9FV71	SMART:SM01372	SUPFAM:SSF144074	SUPFAM:SSF46785	UniParc:UPI000009EA22
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:

Description

E2FBTranscription factor E2FB [Source:UniProtKB/Swiss-Prot;Acc:Q9FV71]

Coordinates

chr5:+:7360535..7364505

Molecular Weight (calculated)

51656.1 Da

IEP (calculated)

4.382

GRAVY (calculated)

-0.672

Length

469 amino acids

Sequence
(BLAST)

001: MSEEVPQQFP SSKRQLHPSL SSMKPPLVAP GEYHRFDAAE TRGGGAVADQ VVSDAIVIKS TLKRKTDLVN QIVEVNELNT GVLQTPVSGK GGKAKKTSRS
101: AKSNKSGTLA SGSNAGSPGN NFAQAGTCRY DSSLGLLTKK FINLIKQAED GILDLNKAAD TLEVQKRRIY DITNVLEGIG LIEKTLKNRI QWKGLDVSKP
201: GETIESIANL QDEVQNLAAE EARLDDQIRE SQERLTSLSE DENNKRLLFV TENDIKNLPC FQNKTLIAVK APHGTTLEVP DPDEAGGYQR RYRIILRSTM
301: GPIDVYLVSQ FEESFEDIPQ ADEPSNVPDE PSNVPDVPSN LPSTSGLPEN HDVSMPMKEE STERNMETQE VDDTQRVYSD IESHDFVDGI MKIVPPDLDM
401: GVDYWFRSEV GEVSITDMWP DESGPDWNQM ITFDQDHAGP SDNKILEQPQ TPSSPTPEES TATRSPTGS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.