Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G039880.1 | Barley | nucleus, plastid | 66.4 | 99.76 |
| TraesCS4A01G149300.1 | Wheat | nucleus | 72.83 | 83.27 |
| TraesCS4B01G158500.1 | Wheat | plastid | 78.78 | 82.21 |
| Zm00001d052977_P001 | Maize | plastid | 65.76 | 70.15 |
| EES10011 | Sorghum | plastid | 66.72 | 68.59 |
| Os11t0586300-01 | Rice | plastid | 56.43 | 65.36 |
| VIT_05s0020g04440.t01 | Wine grape | plastid | 50.96 | 55.52 |
| Solyc06g053920.2.1 | Tomato | nucleus, plastid | 49.2 | 55.33 |
| Bra023783.1-P | Field mustard | nucleus | 44.37 | 54.98 |
| PGSC0003DMT400042064 | Potato | plastid | 48.39 | 54.33 |
| GSMUA_Achr8P26900_001 | Banana | mitochondrion, plastid | 48.71 | 53.91 |
| GSMUA_Achr1P14060_001 | Banana | plastid | 49.04 | 53.23 |
| KRH69067 | Soybean | mitochondrion, nucleus | 46.14 | 49.91 |
| AT3G55760.1 | Thale cress | plastid | 46.3 | 49.83 |
| CDY40826 | Canola | mitochondrion, nucleus, plastid | 45.18 | 49.38 |
| CDY35481 | Canola | mitochondrion, nucleus, plastid | 38.59 | 48.19 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G039870.1 | EnsemblPlantsGene:HORVU4Hr1G039870 | PANTHER:PTHR34113 | PANTHER:PTHR34113:SF2 | SEG:seg | UniParc:UPI000B47114B |
| UniProt:A0A287NUN2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:306487884..306492118
Molecular Weight (calculated)
69912.0 Da
IEP (calculated)
6.482
GRAVY (calculated)
-1.022
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: TSSLLRLLRS LHSESSRMAT NSASIIPAAS HLHRLHGRLL LHARRGAGQR VVVVRAVSGD GGRGGGPSYL DMWKKAVDRE RRSAELAYRL QPSPPPAEAE
101: AEAPPQADVE RRTARFEEML RVPREERDRV QRTQVIDRAA AALAAARAVL KEPPQSSPTP QPHKPTPATG VAEPGNVFDS RKAAKGLEDQ GSGQDSLPAA
201: SNSEKVTNSG DSYPSKQASS KLGTPGPDFW SWLPPVDSSS EPRESNTVLK PSKKVDSFSS QPEMLMEKER SADFLSLPFV ASFFEKKEDR SLPPFQSFVE
301: PENTDSKAKP VADAEEAFET QFSQNAAETA RALSTSDDKS SHGIDPDGSK WWKETGVEQR PDGVVCKWTV VRGVSADGSV EFEDKYWEAS DRFDHKELGS
401: EKSGRDARGN VWREYWKESM WQDFTSGLMH MEKTADKWGK NGKGEQWQEK WWEQYDSSGK AEKSADKWCS LDPNTPLDAG HAHVWHERWG ETYDGCGGSV
501: KYTDKWAERS EGDGWSKWGD KWDEHFDPNR HGVKQGETWW EGKYGDRWNR TWGEGHNGSG WVHKYGRSSS GEHWDTHEPQ ETWYESYPHF GFHHCFENSV
601: QLLSVSRQPP KNFKLGKRVD AS
101: AEAPPQADVE RRTARFEEML RVPREERDRV QRTQVIDRAA AALAAARAVL KEPPQSSPTP QPHKPTPATG VAEPGNVFDS RKAAKGLEDQ GSGQDSLPAA
201: SNSEKVTNSG DSYPSKQASS KLGTPGPDFW SWLPPVDSSS EPRESNTVLK PSKKVDSFSS QPEMLMEKER SADFLSLPFV ASFFEKKEDR SLPPFQSFVE
301: PENTDSKAKP VADAEEAFET QFSQNAAETA RALSTSDDKS SHGIDPDGSK WWKETGVEQR PDGVVCKWTV VRGVSADGSV EFEDKYWEAS DRFDHKELGS
401: EKSGRDARGN VWREYWKESM WQDFTSGLMH MEKTADKWGK NGKGEQWQEK WWEQYDSSGK AEKSADKWCS LDPNTPLDAG HAHVWHERWG ETYDGCGGSV
501: KYTDKWAERS EGDGWSKWGD KWDEHFDPNR HGVKQGETWW EGKYGDRWNR TWGEGHNGSG WVHKYGRSSS GEHWDTHEPQ ETWYESYPHF GFHHCFENSV
601: QLLSVSRQPP KNFKLGKRVD AS
001: MALRLGVSIG AALGSSHWDD GQRVRQRDFS ASVNFTAPVT SRRSLRGSRT GVRILRVSNE GRESYLDMWK NAVDREKKEK AFEKIAENVV AVDGEKEKGG
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS
Arabidopsis Description
At3g55760 [Source:UniProtKB/TrEMBL;Acc:Q5EAH9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.