Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
22065420
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G039880.1 | Barley | nucleus, plastid | 56.09 | 78.99 |
| EES10011 | Sorghum | plastid | 79.59 | 76.69 |
| TraesCS4A01G149300.1 | Wheat | nucleus | 67.24 | 72.06 |
| TraesCS4B01G158500.1 | Wheat | plastid | 69.98 | 68.46 |
| Os11t0586300-01 | Rice | plastid | 61.58 | 66.85 |
| HORVU4Hr1G039870.1 | Barley | mitochondrion, nucleus, plastid | 70.15 | 65.76 |
| Solyc06g053920.2.1 | Tomato | nucleus, plastid | 52.32 | 55.15 |
| Bra023783.1-P | Field mustard | nucleus | 46.83 | 54.38 |
| PGSC0003DMT400042064 | Potato | plastid | 51.63 | 54.33 |
| GSMUA_Achr8P26900_001 | Banana | mitochondrion, plastid | 51.8 | 53.74 |
| VIT_05s0020g04440.t01 | Wine grape | plastid | 52.32 | 53.42 |
| GSMUA_Achr1P14060_001 | Banana | plastid | 51.8 | 52.71 |
| KRH69067 | Soybean | mitochondrion, nucleus | 49.74 | 50.43 |
| AT3G55760.1 | Thale cress | plastid | 49.23 | 49.65 |
| CDY40826 | Canola | mitochondrion, nucleus, plastid | 47.68 | 48.86 |
| CDY35481 | Canola | mitochondrion, nucleus, plastid | 40.31 | 47.19 |
| Zm00001d027532_P002 | Maize | nucleus | 18.87 | 42.8 |
| Zm00001d048349_P002 | Maize | plastid | 23.5 | 31.79 |
Protein Annotations
| EntrezGene:103654538 | MapMan:35.2 | ProteinID:AQK58480.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0005982 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0030246 |
| GO:GO:0043036 | GO:GO:2001070 | UniProt:K7V3T9 | PANTHER:PTHR34113 | PANTHER:PTHR34113:SF2 | UniParc:UPI000221C93C |
| EnsemblPlantsGene:Zm00001d052977 | EnsemblPlants:Zm00001d052977_P001 | EnsemblPlants:Zm00001d052977_T001 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:-:206919670..206923445
Molecular Weight (calculated)
65511.2 Da
IEP (calculated)
7.060
GRAVY (calculated)
-1.027
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASNAASVS SAAPRLLLLR RRGGASGSAQ HRNARFRAAA GGGSYLDMWK KAVERERRSA DLARRLQAPP AEADAPAPAP PVEDVRRRTA RFEEMLRVPR
101: EERDRVQRNQ VIDRAAAALA AARAVLKEPP AFSPPPTPPQ VAETGKVGSA GGGAARGSDR NSRSAARAQL SPSAEVQDSG GSSPHNQSSS KLGTPGPDFW
201: SWLPPVQDSS KQKESNTGLK PSKKLDTFSS QPDLLMEKER LADSLPLPFE TAFFKKEDRS LPPFQSFAEP ENVDSSADLA ADKEDTFEEQ FSKNAAEVAR
301: ALSESVGKPS HGIHLDGSMW WKEVGVERRP DGVVCKWTVI RGVSADGAVE WEDKYWEASD RFDHKELGSE KSGRDAAGNV WREYWKESMW QDYTCGVMHM
401: EKNADKWGQN GKGEQWQEQW FEHYDSTGKT EKWADKWCSL DPNTPLDVGH AHVWHERWGE KYDGLGGSEK YTDKWAERSE GDGWSKWGDK WDEHFDLNGH
501: GVKQGETWWA GKHGDRWNRT WGERHNGSGW VHKYGRSSSG EHWDTHAPQD TWYERFPHFG FYHCFENSPQ LRSVKRQPPP PRK
101: EERDRVQRNQ VIDRAAAALA AARAVLKEPP AFSPPPTPPQ VAETGKVGSA GGGAARGSDR NSRSAARAQL SPSAEVQDSG GSSPHNQSSS KLGTPGPDFW
201: SWLPPVQDSS KQKESNTGLK PSKKLDTFSS QPDLLMEKER LADSLPLPFE TAFFKKEDRS LPPFQSFAEP ENVDSSADLA ADKEDTFEEQ FSKNAAEVAR
301: ALSESVGKPS HGIHLDGSMW WKEVGVERRP DGVVCKWTVI RGVSADGAVE WEDKYWEASD RFDHKELGSE KSGRDAAGNV WREYWKESMW QDYTCGVMHM
401: EKNADKWGQN GKGEQWQEQW FEHYDSTGKT EKWADKWCSL DPNTPLDVGH AHVWHERWGE KYDGLGGSEK YTDKWAERSE GDGWSKWGDK WDEHFDLNGH
501: GVKQGETWWA GKHGDRWNRT WGERHNGSGW VHKYGRSSSG EHWDTHAPQD TWYERFPHFG FYHCFENSPQ LRSVKRQPPP PRK
001: MALRLGVSIG AALGSSHWDD GQRVRQRDFS ASVNFTAPVT SRRSLRGSRT GVRILRVSNE GRESYLDMWK NAVDREKKEK AFEKIAENVV AVDGEKEKGG
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS
Arabidopsis Description
At3g55760 [Source:UniProtKB/TrEMBL;Acc:Q5EAH9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.