CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G039880.1	Barley	nucleus, plastid	55.37	80.92
Zm00001d052977_P001	Maize	plastid	76.69	79.59
TraesCS4A01G149300.1	Wheat	nucleus	65.95	73.35
TraesCS4B01G158500.1	Wheat	plastid	68.76	69.8
Os11t0586300-01	Rice	plastid	60.33	67.97
HORVU4Hr1G039870.1	Barley	mitochondrion, nucleus, plastid	68.59	66.72
Solyc06g053920.2.1	Tomato	nucleus, plastid	50.74	55.52
Bra023783.1-P	Field mustard	nucleus	45.29	54.58
PGSC0003DMT400042064	Potato	plastid	49.92	54.51
GSMUA_Achr8P26900_001	Banana	mitochondrion, plastid	49.59	53.38
VIT_05s0020g04440.t01	Wine grape	plastid	49.92	52.89
GSMUA_Achr1P14060_001	Banana	plastid	49.26	52.01
CDY40826	Canola	mitochondrion, nucleus, plastid	47.6	50.62
AT3G55760.1	Thale cress	plastid	48.1	50.35
KRH69067	Soybean	mitochondrion, nucleus	47.77	50.26
CDY35481	Canola	mitochondrion, nucleus, plastid	40.33	49.0
OQU93301	Sorghum	plastid	22.64	31.93

Protein Annotations

MapMan:35.2	EntrezGene:8062676	UniProt:C5Y5C1	EnsemblPlants:EES10011	ProteinID:EES10011	ProteinID:EES10011.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0005982	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0030246	GO:GO:0043036	GO:GO:2001070	PANTHER:PTHR34113
PANTHER:PTHR34113:SF2	EnsemblPlantsGene:SORBI_3005G167800	UniParc:UPI0001A86C7D	RefSeq:XP_002451023.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:64651919..64655299

Molecular Weight (calculated)

67342.1 Da

IEP (calculated)

7.310

GRAVY (calculated)

-0.984

Length

605 amino acids

Sequence
(BLAST)

001: MATSNAASVS SAAPRLLLLR RRGGARASAS AQHRNARFRT VAAAASVTSA GGGSGGGSYL DMWRKAVERE RRSAELARRL QEAPPTSPAA EADAPPAPGA
101: PVEDVRRRTA RFEEMLRVPP EERDRVQRRQ VIDRAAAALA AARAVLKEPP PASPPSTPPQ VAETAKVGSV AAGAAARGSD RSSRPSARAQ LSSPSAEVPD
201: SGVSSPSKQS SSKLGTPGPD FWSWLPPVQD SSKQKESGTG LKPSKKMDAF SSQPDLLMEK ERSADSLSLP FETAFFKKKE DRSLPPFQSF AEPENVDSKA
301: DLAADKKDTF EEQFSKNAAE VARALSESTE KSSHGIHLDG SMWWKETGVE QRPDGVVCKW TVIRGVSADG AVEFEDKYWE ASDRFDHKEL GSEKSGRDAA
401: GNVWREYWKE SMWQDYTCGV MHMEKTADKW GQNGKGEQWQ EQWFEHYDST GKTEKWADKW CSLDPNTPLD VGHAHVWHER WGENYDGYGG STKYTDKWAE
501: RSEGDGWSKW GDKWDEHFDP NGHGTKQGET WWAGKYGDRW NRTWGEGHNG SGWVHKYGRS SSGEHWDTHV PQDTWYERFP HFGFYHCFEN SAQLRSVKRQ
601: PPPRK

Best Arabidopsis Sequence Match ( AT3G55760.2 )
(BLAST)

001: MALRLGVSIG AALGSSHWDD GQRVRQRDFS ASVNFTAPVT SRRSLRGSRT GVRILRVSNE GRESYLDMWK NAVDREKKEK AFEKIAENVV AVDGEKEKGG
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS

Arabidopsis Description

At3g55760 [Source:UniProtKB/TrEMBL;Acc:Q5EAH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.