Factsheet for AT3G55760.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023783.1-P	Field mustard	nucleus	73.18	84.26
CDY35481	Canola	mitochondrion, nucleus, plastid	66.78	77.51
CDY40826	Canola	mitochondrion, nucleus, plastid	75.61	76.8
HORVU4Hr1G039880.1	Barley	nucleus, plastid	42.56	59.42
Solyc06g053920.2.1	Tomato	nucleus, plastid	53.98	56.42
PGSC0003DMT400042064	Potato	plastid	52.94	55.23
VIT_05s0020g04440.t01	Wine grape	plastid	54.5	55.17
KRH69067	Soybean	mitochondrion, nucleus	52.94	53.22
GSMUA_Achr8P26900_001	Banana	mitochondrion, plastid	51.04	52.49
TraesCS4A01G149300.1	Wheat	nucleus	47.06	50.0
Zm00001d052977_P001	Maize	plastid	49.65	49.23
GSMUA_Achr1P14060_001	Banana	plastid	48.44	48.87
Os11t0586300-01	Rice	plastid	44.98	48.42
TraesCS4B01G158500.1	Wheat	plastid	49.65	48.15
EES10011	Sorghum	plastid	50.35	48.1
HORVU4Hr1G039870.1	Barley	mitochondrion, nucleus, plastid	49.83	46.3
AT1G42430.1	Thale cress	nucleus	22.66	30.75

Protein Annotations

MapMan:35.2	EntrezGene:824742	UniProt:A0A178VES7	ProteinID:AEE79431.1	ProteinID:AEE79432.1	ProteinID:AEE79433.1
ArrayExpress:AT3G55760	EnsemblPlantsGene:AT3G55760	RefSeq:AT3G55760	TAIR:AT3G55760	RefSeq:AT3G55760-TAIR-G	EnsemblPlants:AT3G55760.1
TAIR:AT3G55760.1	Unigene:At.1705	EMBL:BT020590	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005982	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0030246
GO:GO:0043036	GO:GO:2001070	RefSeq:NP_001190098.1	RefSeq:NP_191135.1	RefSeq:NP_850708.1	ProteinID:OAP04749.1
PO:PO:0000013	PO:PO:0000037	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020100	PO:PO:0025022	PANTHER:PTHR34113	PANTHER:PTHR34113:SF2	UniProt:Q5EAH9
UniParc:UPI000016371C	SEG:seg	:	:	:	:

Description

At3g55760 [Source:UniProtKB/TrEMBL;Acc:Q5EAH9]

Coordinates

chr3:+:20700314..20703130

Molecular Weight (calculated)

65576.1 Da

IEP (calculated)

5.167

GRAVY (calculated)

-0.942

Length

578 amino acids

Sequence
(BLAST)

001: MALRLGVSIG AALGSSHWDD GQRVRQRDFS ASVNFTAPVT SRRSLRGSRT GVRILRVSNE GRESYLDMWK NAVDREKKEK AFEKIAENVV AVDGEKEKGG
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.