Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- peroxisome 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P26900_001 | Banana | mitochondrion, plastid | 63.87 | 65.12 |
| HORVU4Hr1G039880.1 | Barley | nucleus, plastid | 45.03 | 62.32 |
| VIT_05s0020g04440.t01 | Wine grape | plastid | 56.02 | 56.22 |
| Solyc06g053920.2.1 | Tomato | nucleus, plastid | 53.23 | 55.15 |
| PGSC0003DMT400042064 | Potato | plastid | 52.53 | 54.33 |
| TraesCS4A01G149300.1 | Wheat | nucleus | 51.31 | 54.04 |
| Bra023783.1-P | Field mustard | nucleus | 46.6 | 53.19 |
| Zm00001d052977_P001 | Maize | plastid | 52.71 | 51.8 |
| TraesCS4B01G158500.1 | Wheat | plastid | 53.05 | 51.01 |
| Os11t0586300-01 | Rice | plastid | 46.77 | 49.91 |
| KRH69067 | Soybean | mitochondrion, nucleus | 49.56 | 49.39 |
| EES10011 | Sorghum | plastid | 52.01 | 49.26 |
| HORVU4Hr1G039870.1 | Barley | mitochondrion, nucleus, plastid | 53.23 | 49.04 |
| AT3G55760.1 | Thale cress | plastid | 48.87 | 48.44 |
| CDY40826 | Canola | mitochondrion, nucleus, plastid | 47.99 | 48.33 |
| CDY35481 | Canola | mitochondrion, nucleus, plastid | 39.97 | 45.98 |
| GSMUA_Achr1P02740_001 | Banana | nucleus | 22.51 | 39.21 |
| GSMUA_Achr4P25500_001 | Banana | mitochondrion | 24.26 | 33.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P14060_001 | EnsemblPlants:GSMUA_Achr1T14060_001 | EnsemblPlantsGene:GSMUA_Achr1G14060_001 | PANTHER:PTHR34113 | PANTHER:PTHR34113:SF2 | SEG:seg |
| UniParc:UPI0002960171 | UniProt:M0RZR4 | MapMan:35.2 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G14060_001]
Coordinates
chr1:+:10744857..10750282
Molecular Weight (calculated)
65265.7 Da
IEP (calculated)
6.216
GRAVY (calculated)
-0.870
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAQFSSSC ACAGLRGPLL PPPRRGGRRS LCSAVPSGNS YLDMWKKAME RKRRAQQSRG TRDGGEGGKS PSLEAKTECF NQLLQVPTEE RDRVQRLQVI
101: DRAAAAFAAA RAILNESPVA RSTPDLSERP EMSRAKQGLQ HEDSFLYQSV TLQNGPPGPD FWSWSPPSDT KREPIEASTG LRSAPKLLSQ TYPSNLVIEK
201: EKTIEFLAIP MESTLFGCKH NPPHPPLQSL VEVDKVGKKT TLNASIAAEE KMCGQLFSGQ AAEAVEALSK SNGASEYGMD LGGSQWWRET GIEERPDGVV
301: CKWTLTRGVS ADETVEWEDK FWEAADQYDY KELGSEKSGR DASGNVWREY WKESMWQDMR RGIIHMENTA DKWGKNGKGD EWQEKWWEHY DSSGYAEKWA
401: HKWCSIEPKT PLEAGHAHVW HERWGEKYDG NGGSMKYTDK WAKRSEGDGW SKWGDKWDEH FDSNGHGVKQ GETWWEGRHG EQWNRTWGEW HNGSGWVHKY
501: GKSSNGEHWD THVQQETWYE RFPHYGFEHC FENSVQLRAC NQILLILVVL TRIHINIQEI SEYGFDIVDS VFI
101: DRAAAAFAAA RAILNESPVA RSTPDLSERP EMSRAKQGLQ HEDSFLYQSV TLQNGPPGPD FWSWSPPSDT KREPIEASTG LRSAPKLLSQ TYPSNLVIEK
201: EKTIEFLAIP MESTLFGCKH NPPHPPLQSL VEVDKVGKKT TLNASIAAEE KMCGQLFSGQ AAEAVEALSK SNGASEYGMD LGGSQWWRET GIEERPDGVV
301: CKWTLTRGVS ADETVEWEDK FWEAADQYDY KELGSEKSGR DASGNVWREY WKESMWQDMR RGIIHMENTA DKWGKNGKGD EWQEKWWEHY DSSGYAEKWA
401: HKWCSIEPKT PLEAGHAHVW HERWGEKYDG NGGSMKYTDK WAKRSEGDGW SKWGDKWDEH FDSNGHGVKQ GETWWEGRHG EQWNRTWGEW HNGSGWVHKY
501: GKSSNGEHWD THVQQETWYE RFPHYGFEHC FENSVQLRAC NQILLILVVL TRIHINIQEI SEYGFDIVDS VFI
001: MALRLGVSIG AALGSSHWDD GQRVRQRDFS ASVNFTAPVT SRRSLRGSRT GVRILRVSNE GRESYLDMWK NAVDREKKEK AFEKIAENVV AVDGEKEKGG
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS
Arabidopsis Description
At3g55760 [Source:UniProtKB/TrEMBL;Acc:Q5EAH9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.