Factsheet for Bra023783.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35481	Canola	mitochondrion, nucleus, plastid	83.07	83.73
CDY40826	Canola	mitochondrion, nucleus, plastid	94.42	83.3
AT3G55760.1	Thale cress	plastid	84.26	73.18
HORVU4Hr1G039880.1	Barley	nucleus, plastid	48.61	58.94
Solyc06g053920.2.1	Tomato	nucleus, plastid	59.36	53.89
PGSC0003DMT400042064	Potato	plastid	58.96	53.43
VIT_05s0020g04440.t01	Wine grape	plastid	59.76	52.54
KRH69067	Soybean	mitochondrion, nucleus	59.16	51.65
TraesCS4A01G149300.1	Wheat	nucleus	54.18	50.0
GSMUA_Achr8P26900_001	Banana	mitochondrion, plastid	55.38	49.47
Os11t0586300-01	Rice	plastid	50.4	47.11
Zm00001d052977_P001	Maize	plastid	54.38	46.83
TraesCS4B01G158500.1	Wheat	plastid	55.38	46.64
GSMUA_Achr1P14060_001	Banana	plastid	53.19	46.6
EES10011	Sorghum	plastid	54.58	45.29
HORVU4Hr1G039870.1	Barley	mitochondrion, nucleus, plastid	54.98	44.37
Bra039888.1-P	Field mustard	nucleus	25.7	31.39

Protein Annotations

MapMan:35.2	EnsemblPlantsGene:Bra023783	EnsemblPlants:Bra023783.1	EnsemblPlants:Bra023783.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0005982	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0030246	GO:GO:0043036	GO:GO:2001070	UniProt:M4E4S9	PANTHER:PTHR34113
PANTHER:PTHR34113:SF2	UniParc:UPI0002543F84	SEG:seg	:	:	:

Description

AT3G55760 (E=8e-229) | unknown protein

Coordinates

chrA01:+:19906622..19908394

Molecular Weight (calculated)

57215.9 Da

IEP (calculated)

4.707

GRAVY (calculated)

-1.082

Length

502 amino acids

Sequence
(BLAST)

001: MWKNAVDREK KEKAFEKIAE NVASDGEDGD LNKKSDEFQK ILEVSVEERD RIQRMQVVDR AAAAISAAKA ILASNNSGDG NDGFQDEEKS GNDAKSKGMW
101: SRTVYVPRSE TSGSETPGPD FWSWTPPEMS SNASMDLQPK PSEFPTLSNP VLEKEPSSDS LSIPYESMLS TERHSFVIPP FESLIEVKKE TETETKSISS
201: EHDLDAVSSA NAEEAARVLD GLDDSSSSGV SQDGLKWWKQ TGVEKRPDGV VCRWTMIRGV TADGVVEWQD KYWEASDDFG FKELGSEKSG RDAAGNVWRE
301: FWREAMMQEN GVVHMEKTAD KWGKSGQGDE WQEKWFEHYD ATGKSEKWAH KWCSLDRNTP LDVGHAHVWH ERWGEKYDGQ GGSTKYTDKW AERWVGDGWD
401: KWGDKWDENF NPSAQGVKQG ETWWEGKHGD RWNRSWGEGH NGSGWVHKYG KSSSGEHWDT HEQQETWYER FPHFGFFHCF DNSVQLRAVR KPSDLENDGE
501: KQ

Best Arabidopsis Sequence Match ( AT3G55760.2 )
(BLAST)

001: MALRLGVSIG AALGSSHWDD GQRVRQRDFS ASVNFTAPVT SRRSLRGSRT GVRILRVSNE GRESYLDMWK NAVDREKKEK AFEKIAENVV AVDGEKEKGG
101: DLEKKSDEFQ KILEVSVEER DRIQRMQVVD RAAAAISAAR AILASNNSGD GKEGFPNEDN TVTSEVTETP KNAKLGMWSR TVYVPRSETS GTETPGPDFW
201: SWTPPQGSEI SSVDLQAVEK PAEFPTLPNP VLEKDKSADS LSIPYESMLS SERHSFTIPP FESLIEVRKE AETKPSSETL STEHDLDLIS SANAEEVARV
301: LDSLDESSTH GVSEDGLKWW KQTGVEKRPD GVVCRWTMIR GVTADGVVEW QDKYWEASDD FGFKELGSEK SGRDATGNVW REFWRESMSQ ENGVVHMEKT
401: ADKWGKSGQG DEWQEKWWEH YDATGKSEKW AHKWCSIDRN TPLDAGHAHV WHERWGEKYD GQGGSTKYTD KWAERWVGDG WDKWGDKWDE NFNPSAQGVK
501: QGETWWEGKH GDRWNRSWGE GHNGSGWVHK YGKSSSGEHW DTHVPQETWY EKFPHFGFFH CFDNSVQLRA VKKPSDMS

Arabidopsis Description

At3g55760 [Source:UniProtKB/TrEMBL;Acc:Q5EAH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.