CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027532_P002	Maize	nucleus	58.04	96.89
Zm00001d048349_P002	Maize	plastid	95.34	94.9
Os03t0133300-01	Rice	plastid	74.59	91.69
GSMUA_Achr1P02740_001	Banana	nucleus	64.57	84.19
TraesCS5A01G501000.1	Wheat	cytosol, plastid	81.35	80.79
TraesCS4D01G326500.1	Wheat	plastid	81.12	80.74
TraesCS4B01G329400.1	Wheat	plastid	81.59	80.09
Solyc12g094570.1.1	Tomato	cytosol	38.93	79.9
GSMUA_Achr4P25500_001	Banana	mitochondrion	72.73	74.64
CDX80743	Canola	nucleus, plastid	68.3	71.29
Bra039888.1-P	Field mustard	nucleus	68.07	71.05
CDY48820	Canola	nucleus	68.07	71.05
PGSC0003DMT400083920	Potato	cytosol	9.09	70.91
VIT_18s0001g00110.t01	Wine grape	nucleus	70.86	70.37
PGSC0003DMT400075384	Potato	nucleus	66.67	66.67
AT1G42430.1	Thale cress	nucleus	65.97	66.43
PGSC0003DMT400025823	Potato	plastid	66.2	65.74
Solyc04g082290.2.1	Tomato	plastid	66.2	65.14
KRH51626	Soybean	nucleus, plastid	68.07	65.03
KRH60951	Soybean	nucleus	53.61	61.99
Solyc12g094580.1.1	Tomato	nucleus	19.81	41.46
VIT_03s0038g02700.t01	Wine grape	cytosol	12.59	38.85
EES10011	Sorghum	plastid	31.93	22.64

Protein Annotations

MapMan:3.2.3.1.3	UniProt:A0A1Z5SBJ9	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0030246	GO:GO:0043036	GO:GO:2000904	GO:GO:2001070
EnsemblPlants:OQU93301	ProteinID:OQU93301	ProteinID:OQU93301.1	PANTHER:PTHR34113	PANTHER:PTHR34113:SF3	EnsemblPlantsGene:SORBI_3001G515600
UniParc:UPI000B8B968E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:78243145..78248498

Molecular Weight (calculated)

48885.1 Da

IEP (calculated)

6.218

GRAVY (calculated)

-1.089

Length

429 amino acids

Sequence
(BLAST)

001: MAACSRGLAW PPFDLTTARG PASWPRQRAV IRCCCAGADP LPRRRLSRAA AVAPERAEEW RIDGNKPSAA APGRRRASLT AMPPLPFPAP RSRRQFKQQD
101: FYPRCTPRGP APQSRDTPPK RDTGIASEKE WGINLPDEAV KESGINEDGS TWYRESGEDV GENGYRCRWT RMGGQNHDGS TEWKETWWEK SDWTGYKELG
201: AEKSGKNAEG DSWWEKWKEV LYQDEWSNLA RIERSAEKQA KSGVENAGWY EKWWEKYDAK GWTEKGAHKY GRLNEQSWWE RWGEHYDGRG FVLKWTDKWA
301: ETDLGTKWGD KWEEKFFAGI GSRQGETWHV SPGGERWSRT WGEEHFGNGK VHKYGKSTTG ESWDLVVDEE TYYEAEPHYG WADVVGDSTQ LLSIQPVERP
401: PGVFPAIDFS SAPPPKDAPP GMPPSSPLD

Best Arabidopsis Sequence Match ( AT1G42430.1 )
(BLAST)

001: MSEMAASSAI SLLDIKLRRF GVGASNHELR LTKWFKGDQA GAPTRRFTCF ADMLAPIRRS EKSEERRFDQ KMSAHGAGIK TSSSAVPFAS PKSRFLSKQE
101: KFYPRCTPRL TGPQSRDTPP KRDTGIANEK DWGIDLLNEN VNEAGTNEDG SSWFRESGHD LGDNGYRCRW SRMGGRSHDG SSEWTETWWE KSDWTGYKEL
201: GVEKSGKNSE GDSWWETWQE VLHQDEWSNL ARIERSAQKQ AKSGTENAGW YEKWWEKYDA KGWTEKGAHK YGRLNEQSWW EKWGEHYDGR GSVLKWTDKW
301: AETELGTKWG DKWEEKFFSG IGSRQGETWH VSPNSDRWSR TWGEEHFGNG KVHKYGKSTT GESWDIVVDE ETYYEAEPHY GWADVVGDST QLLSIQPRER
401: PPGVYPNLEF GPSPPPEPDL PPDQPQ

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT1G42430]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.