Factsheet for Zm00001d027532_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g094570.1.1	Tomato	cytosol	64.59	79.43
PGSC0003DMT400083920	Potato	cytosol	15.18	70.91
Os03t0133300-01	Rice	plastid	93.39	68.77
GSMUA_Achr1P02740_001	Banana	nucleus	87.16	68.09
OQU93301	Sorghum	plastid	96.89	58.04
Zm00001d048349_P002	Maize	plastid	97.28	58.0
TraesCS5A01G501000.1	Wheat	cytosol, plastid	91.05	54.17
TraesCS4D01G326500.1	Wheat	plastid	90.66	54.06
TraesCS4B01G329400.1	Wheat	plastid	91.44	53.78
GSMUA_Achr4P25500_001	Banana	mitochondrion	86.38	53.11
CDY48820	Canola	nucleus	83.66	52.31
CDX80743	Canola	nucleus, plastid	83.66	52.31
Bra039888.1-P	Field mustard	nucleus	83.66	52.31
AT1G42430.1	Thale cress	nucleus	83.66	50.47
KRH60951	Soybean	nucleus	72.76	50.4
VIT_18s0001g00110.t01	Wine grape	nucleus	84.44	50.23
PGSC0003DMT400025823	Potato	plastid	83.27	49.54
Solyc04g082290.2.1	Tomato	plastid	82.88	48.85
PGSC0003DMT400075384	Potato	nucleus	81.32	48.72
KRH51626	Soybean	nucleus, plastid	83.27	47.66
VIT_03s0038g02700.t01	Wine grape	cytosol	19.84	36.69
Zm00001d052977_P001	Maize	plastid	42.8	18.87
Solyc12g094580.1.1	Tomato	nucleus	4.28	5.37

Protein Annotations

EnsemblPlants:Zm00001d027532_P002	EnsemblPlants:Zm00001d027532_T002	EnsemblPlantsGene:Zm00001d027532	PANTHER:PTHR34113	PANTHER:PTHR34113:SF3	ProteinID:ONL93380.1
SEG:seg	UniParc:UPI00084478BC	UniProt:A0A1D6JMV9	MapMan:3.2.3.1.3	:	:

Description

No Description!

Coordinates

chr1:+:7558784..7564087

Molecular Weight (calculated)

29855.9 Da

IEP (calculated)

4.791

GRAVY (calculated)

-1.182

Length

257 amino acids

Sequence
(BLAST)

001: MGGQSHDGST EWKETWWEKS DWTGYKELGA EKSGRNAEGD SWWEKWKEVL YQDEWSNLAR IERSAEKQAK SGIENAGWYE KWWEKYDAKG WTEKGAHKYG
101: RLNEQSWWER WGEHYDGRGF VLKWTDKWAE TDLGTKWGDK WEEKFFAGIG SRQGETWHVC PGGERWSRTW GEEHFGNGKV HKYGKSTTGE RWDLVVDEET
201: YYEAEPHYGW ADVVGDSTQL LSIQPVERPP GVFPAIDFSS APPPKDAPPG MPPSPLD

Best Arabidopsis Sequence Match ( AT1G42430.1 )
(BLAST)

001: MSEMAASSAI SLLDIKLRRF GVGASNHELR LTKWFKGDQA GAPTRRFTCF ADMLAPIRRS EKSEERRFDQ KMSAHGAGIK TSSSAVPFAS PKSRFLSKQE
101: KFYPRCTPRL TGPQSRDTPP KRDTGIANEK DWGIDLLNEN VNEAGTNEDG SSWFRESGHD LGDNGYRCRW SRMGGRSHDG SSEWTETWWE KSDWTGYKEL
201: GVEKSGKNSE GDSWWETWQE VLHQDEWSNL ARIERSAQKQ AKSGTENAGW YEKWWEKYDA KGWTEKGAHK YGRLNEQSWW EKWGEHYDGR GSVLKWTDKW
301: AETELGTKWG DKWEEKFFSG IGSRQGETWH VSPNSDRWSR TWGEEHFGNG KVHKYGKSTT GESWDIVVDE ETYYEAEPHY GWADVVGDST QLLSIQPRER
401: PPGVYPNLEF GPSPPPEPDL PPDQPQ

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT1G42430]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.