Factsheet for TraesCS5A01G501000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G329400.1	Wheat	plastid	98.15	97.03
TraesCS4D01G326500.1	Wheat	plastid	91.9	92.11
Os03t0133300-01	Rice	plastid	73.61	91.12
Zm00001d027532_P002	Maize	nucleus	54.17	91.05
GSMUA_Achr1P02740_001	Banana	nucleus	63.19	82.98
OQU93301	Sorghum	plastid	80.79	81.35
Zm00001d048349_P002	Maize	plastid	80.79	80.97
Solyc12g094570.1.1	Tomato	cytosol	38.19	78.95
GSMUA_Achr4P25500_001	Banana	mitochondrion	71.06	73.44
PGSC0003DMT400083920	Potato	cytosol	9.03	70.91
CDX80743	Canola	nucleus, plastid	66.44	69.83
Bra039888.1-P	Field mustard	nucleus	65.97	69.34
CDY48820	Canola	nucleus	65.97	69.34
VIT_18s0001g00110.t01	Wine grape	nucleus	68.52	68.52
AT1G42430.1	Thale cress	nucleus	65.51	66.43
PGSC0003DMT400075384	Potato	nucleus	64.35	64.8
PGSC0003DMT400025823	Potato	plastid	64.58	64.58
KRH51626	Soybean	nucleus, plastid	66.9	64.37
Solyc04g082290.2.1	Tomato	plastid	64.58	63.99
KRH60951	Soybean	nucleus	50.46	58.76
Solyc12g094580.1.1	Tomato	nucleus	18.75	39.51
VIT_03s0038g02700.t01	Wine grape	cytosol	12.27	38.13
TraesCS4A01G149300.1	Wheat	nucleus	32.18	25.55

Protein Annotations

EnsemblPlants:TraesCS5A01G501000.1	EnsemblPlantsGene:TraesCS5A01G501000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0030246	GO:GO:0043036	GO:GO:2000904	GO:GO:2001070
PANTHER:PTHR34113	PANTHER:PTHR34113:SF3	SEG:seg	MapMan:3.2.3.1.3	:	:

Description

No Description!

Coordinates

chr5A:+:666734108..666738630

Molecular Weight (calculated)

48830.1 Da

IEP (calculated)

7.002

GRAVY (calculated)

-1.073

Length

432 amino acids

Sequence
(BLAST)

001: MAVCSGGLVA PPFDLSAIRA GAGPWPRPAR GPARAIRCCC YARPDPTPPR RLLLLSAKAS AAASPERVHG SKPIARGRRR VGLTVTPSLP FPSSRSRRQP
101: KQNDFYPRCT PRGPAPQSRD TPPKRDTGIA SEKEWGINLL DEAVKESGTN EDGSTWYRES GEDLGENGYR CRWARMGGQT HDGSTEWKET WWEKSDWTGY
201: KELGAEKSGK NAEGDSWWEK WKEVLHQDEW SNLARLEKSA EKQAKSGTEN AGWYEKWWEK YDAKGWTEKG AHKYGRLNEQ SWWERWGEHY NGRGSVLKWT
301: DKWAETDLGT RWGDKWEEKF FAGIGSRQGE TWHASPGGDR WSRTWGEEHF GNGKVHKYGK STTGESWDLV VDEETYYEAD PHYGWADVVG DSSQLLSIQP
401: VERPPGVFPT IDFSSSPPRT EEPPGMPPSS LE

Best Arabidopsis Sequence Match ( AT1G42430.1 )
(BLAST)

001: MSEMAASSAI SLLDIKLRRF GVGASNHELR LTKWFKGDQA GAPTRRFTCF ADMLAPIRRS EKSEERRFDQ KMSAHGAGIK TSSSAVPFAS PKSRFLSKQE
101: KFYPRCTPRL TGPQSRDTPP KRDTGIANEK DWGIDLLNEN VNEAGTNEDG SSWFRESGHD LGDNGYRCRW SRMGGRSHDG SSEWTETWWE KSDWTGYKEL
201: GVEKSGKNSE GDSWWETWQE VLHQDEWSNL ARIERSAQKQ AKSGTENAGW YEKWWEKYDA KGWTEKGAHK YGRLNEQSWW EKWGEHYDGR GSVLKWTDKW
301: AETELGTKWG DKWEEKFFSG IGSRQGETWH VSPNSDRWSR TWGEEHFGNG KVHKYGKSTT GESWDIVVDE ETYYEAEPHY GWADVVGDST QLLSIQPRER
401: PPGVYPNLEF GPSPPPEPDL PPDQPQ

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT1G42430]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.