Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- plasma membrane 1
- extracellular 1
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g082290.2.1 | Tomato | plastid | 93.75 | 92.89 |
| Zm00001d027532_P002 | Maize | nucleus | 49.54 | 83.27 |
| GSMUA_Achr1P02740_001 | Banana | nucleus | 60.65 | 79.64 |
| Os03t0133300-01 | Rice | plastid | 63.66 | 78.8 |
| PGSC0003DMT400083920 | Potato | cytosol | 9.95 | 78.18 |
| Bra039888.1-P | Field mustard | nucleus | 70.6 | 74.21 |
| CDY48820 | Canola | nucleus | 70.6 | 74.21 |
| CDX80743 | Canola | nucleus, plastid | 70.37 | 73.97 |
| PGSC0003DMT400075384 | Potato | nucleus | 72.69 | 73.19 |
| AT1G42430.1 | Thale cress | nucleus | 71.53 | 72.54 |
| VIT_18s0001g00110.t01 | Wine grape | nucleus | 71.3 | 71.3 |
| KRH51626 | Soybean | nucleus, plastid | 71.76 | 69.04 |
| GSMUA_Achr4P25500_001 | Banana | mitochondrion | 66.2 | 68.42 |
| OQU93301 | Sorghum | plastid | 65.74 | 66.2 |
| Zm00001d048349_P002 | Maize | plastid | 65.28 | 65.43 |
| TraesCS4D01G326500.1 | Wheat | plastid | 64.58 | 64.73 |
| KRH60951 | Soybean | nucleus | 55.56 | 64.69 |
| TraesCS5A01G501000.1 | Wheat | cytosol, plastid | 64.58 | 64.58 |
| TraesCS4B01G329400.1 | Wheat | plastid | 64.58 | 63.84 |
| VIT_03s0038g02700.t01 | Wine grape | cytosol | 12.73 | 39.57 |
| PGSC0003DMT400042064 | Potato | plastid | 31.48 | 24.55 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400025823 | EnsemblPlantsGene:PGSC0003DMG400009975 | EntrezGene:102592522 | PANTHER:PTHR34113 | PANTHER:PTHR34113:SF3 | PGSC:PGSC0003DMG400009975 |
| RefSeq:XP_006342115.1 | SEG:seg | UniParc:UPI000296C271 | UniProt:M1AM48 | MapMan:3.2.3.1.3 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400009975]
Coordinates
chr4:-:71514449..71519948
Molecular Weight (calculated)
48928.8 Da
IEP (calculated)
5.413
GRAVY (calculated)
-1.027
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASASSRGF TAPIGATVEV FPTSHNGFVE FRRKKRSSIG GFFSIQCCCS DSVMPIRGGS GSGNGVDKGD DGRLDSKKIT ANYMRTQASS PMPFASPQSR
101: FVSKPEKFFS RCTPRNSGPK SRDSPPKRDT GIANEKDWGI SMLNDNVNET GVNEDGSTWY RESGEDLGDN GYRCRWTRMG GQSSDGTLEW KETWWEKSDW
201: TGYKELGVEK SGKNVEGDAW WETWREVLHQ DEWSNLARIE RSAQKQAKSG TENAGWYENW WEKYDAKGWT EKGAHKYGRL NEQSWWEKWG EHYDGRGSVL
301: KWTDKWAETE LGTKWGDKWE EKFFAGIGSR QGETWHVSPV GDRWSRTWGE EHFGNGKVHK YGKSTTGESW DIVVDEGTYY EAEPHYGWAD VVGDSSQLLS
401: IQPRDRPPGV FPSMDFGPSL PPEDEFPPTL SQ
101: FVSKPEKFFS RCTPRNSGPK SRDSPPKRDT GIANEKDWGI SMLNDNVNET GVNEDGSTWY RESGEDLGDN GYRCRWTRMG GQSSDGTLEW KETWWEKSDW
201: TGYKELGVEK SGKNVEGDAW WETWREVLHQ DEWSNLARIE RSAQKQAKSG TENAGWYENW WEKYDAKGWT EKGAHKYGRL NEQSWWEKWG EHYDGRGSVL
301: KWTDKWAETE LGTKWGDKWE EKFFAGIGSR QGETWHVSPV GDRWSRTWGE EHFGNGKVHK YGKSTTGESW DIVVDEGTYY EAEPHYGWAD VVGDSSQLLS
401: IQPRDRPPGV FPSMDFGPSL PPEDEFPPTL SQ
001: MSEMAASSAI SLLDIKLRRF GVGASNHELR LTKWFKGDQA GAPTRRFTCF ADMLAPIRRS EKSEERRFDQ KMSAHGAGIK TSSSAVPFAS PKSRFLSKQE
101: KFYPRCTPRL TGPQSRDTPP KRDTGIANEK DWGIDLLNEN VNEAGTNEDG SSWFRESGHD LGDNGYRCRW SRMGGRSHDG SSEWTETWWE KSDWTGYKEL
201: GVEKSGKNSE GDSWWETWQE VLHQDEWSNL ARIERSAQKQ AKSGTENAGW YEKWWEKYDA KGWTEKGAHK YGRLNEQSWW EKWGEHYDGR GSVLKWTDKW
301: AETELGTKWG DKWEEKFFSG IGSRQGETWH VSPNSDRWSR TWGEEHFGNG KVHKYGKSTT GESWDIVVDE ETYYEAEPHY GWADVVGDST QLLSIQPRER
401: PPGVYPNLEF GPSPPPEPDL PPDQPQ
101: KFYPRCTPRL TGPQSRDTPP KRDTGIANEK DWGIDLLNEN VNEAGTNEDG SSWFRESGHD LGDNGYRCRW SRMGGRSHDG SSEWTETWWE KSDWTGYKEL
201: GVEKSGKNSE GDSWWETWQE VLHQDEWSNL ARIERSAQKQ AKSGTENAGW YEKWWEKYDA KGWTEKGAHK YGRLNEQSWW EKWGEHYDGR GSVLKWTDKW
301: AETELGTKWG DKWEEKFFSG IGSRQGETWH VSPNSDRWSR TWGEEHFGNG KVHKYGKSTT GESWDIVVDE ETYYEAEPHY GWADVVGDST QLLSIQPRER
401: PPGVYPNLEF GPSPPPEPDL PPDQPQ
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT1G42430]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.