Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • mitochondrion 3
  • cytosol 2
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:extracellular, nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400083920 Potato cytosol 25.84 98.18
Zm00001d027532_P002 Maize nucleus 79.43 64.59
GSMUA_Achr1P02740_001 Banana nucleus 80.38 51.06
Os03t0133300-01 Rice plastid 78.95 47.28
PGSC0003DMT400075384 Potato nucleus 94.74 46.15
KRH60951 Soybean nucleus 81.34 45.82
Bra039888.1-P Field mustard nucleus 82.78 42.09
CDY48820 Canola nucleus 82.78 42.09
CDX80743 Canola nucleus, plastid 82.78 42.09
AT1G42430.1 Thale cress nucleus 83.25 40.85
GSMUA_Achr4P25500_001 Banana mitochondrion 81.34 40.67
VIT_18s0001g00110.t01 Wine grape nucleus 83.25 40.28
Solyc04g082290.2.1 Tomato plastid 83.73 40.14
OQU93301 Sorghum plastid 79.9 38.93
TraesCS4D01G326500.1 Wheat plastid 79.43 38.52
Zm00001d048349_P002 Maize plastid 79.43 38.52
TraesCS5A01G501000.1 Wheat cytosol, plastid 78.95 38.19
TraesCS4B01G329400.1 Wheat plastid 79.43 37.99
KRH51626 Soybean nucleus, plastid 81.34 37.86
VIT_03s0038g02700.t01 Wine grape cytosol 16.27 24.46
Solyc06g053920.2.1 Tomato nucleus, plastid 41.63 15.73
Solyc12g094580.1.1 Tomato nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc12g094570.1.1EnsemblPlantsGene:Solyc12g094570.1PANTHER:PTHR34113PANTHER:PTHR34113:SF3UniParc:UPI0002769898UniProt:K4DH29
MapMan:3.2.3.1.3:::::
Description
No Description!
Coordinates
chr12:-:64760207..64761892
Molecular Weight (calculated)
23939.1 Da
IEP (calculated)
5.052
GRAVY (calculated)
-1.170
Length
209 amino acids
Sequence
(BLAST)
001: MAGSSSSRRM EVVNLARIER SAQKQAKSGT ENAGWYENWS EKYDAKGWTE KGAHKYGRLN EQSWWEKWGE EYDGRGSVLK WTDKWAESEL GTKWGDKWEE
101: KFVAGIGSRQ GETWHASLSS ERWSRTWGEE HFGNGKVHKY GKSTTGESWD MVVDEKTYYE AEPHYGWADV VGDSSQLFSI QPREQPPGVY PNIDFGSSVP
201: PDDESPPTR
Best Arabidopsis Sequence Match ( AT1G42430.1 )
(BLAST)
001: MSEMAASSAI SLLDIKLRRF GVGASNHELR LTKWFKGDQA GAPTRRFTCF ADMLAPIRRS EKSEERRFDQ KMSAHGAGIK TSSSAVPFAS PKSRFLSKQE
101: KFYPRCTPRL TGPQSRDTPP KRDTGIANEK DWGIDLLNEN VNEAGTNEDG SSWFRESGHD LGDNGYRCRW SRMGGRSHDG SSEWTETWWE KSDWTGYKEL
201: GVEKSGKNSE GDSWWETWQE VLHQDEWSNL ARIERSAQKQ AKSGTENAGW YEKWWEKYDA KGWTEKGAHK YGRLNEQSWW EKWGEHYDGR GSVLKWTDKW
301: AETELGTKWG DKWEEKFFSG IGSRQGETWH VSPNSDRWSR TWGEEHFGNG KVHKYGKSTT GESWDIVVDE ETYYEAEPHY GWADVVGDST QLLSIQPRER
401: PPGVYPNLEF GPSPPPEPDL PPDQPQ
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT1G42430]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.