Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G345200.4 | Wheat | nucleus | 91.63 | 95.04 |
| TraesCS2A01G346500.1 | Wheat | nucleus | 91.24 | 94.63 |
| TraesCS2B01G364800.5 | Wheat | nucleus | 92.16 | 94.42 |
| Os04t0488000-01 | Rice | nucleus | 77.42 | 82.11 |
| EES12419 | Sorghum | nucleus | 75.17 | 81.79 |
| Zm00001d003222_P016 | Maize | nucleus | 74.24 | 80.09 |
| Zm00001d025739_P006 | Maize | nucleus | 74.24 | 77.64 |
| GSMUA_Achr8P01120_001 | Banana | nucleus | 50.46 | 65.74 |
| GSMUA_Achr8P08900_001 | Banana | nucleus | 53.52 | 62.1 |
| HORVU6Hr1G054600.5 | Barley | nucleus | 55.78 | 61.86 |
| GSMUA_Achr5P25400_001 | Banana | nucleus | 56.44 | 60.89 |
| GSMUA_Achr11P... | Banana | nucleus | 55.51 | 59.89 |
| CDY01821 | Canola | nucleus | 54.05 | 58.39 |
| Bra004236.1-P | Field mustard | nucleus | 53.92 | 57.26 |
| CDX96081 | Canola | nucleus | 53.92 | 57.26 |
| KRH42643 | Soybean | nucleus | 55.78 | 56.38 |
| KRH58745 | Soybean | nucleus | 55.78 | 56.3 |
| VIT_01s0010g02550.t01 | Wine grape | nucleus | 56.18 | 56.1 |
| KRH31446 | Soybean | nucleus | 54.32 | 55.12 |
| AT1G67580.1 | Thale cress | nucleus | 54.71 | 54.79 |
| KRG97452 | Soybean | nucleus | 44.22 | 53.19 |
| PGSC0003DMT400044987 | Potato | nucleus | 55.11 | 52.07 |
| Solyc05g014760.2.1 | Tomato | nucleus | 54.58 | 50.8 |
| PGSC0003DMT400034649 | Potato | nucleus | 55.11 | 50.55 |
| HORVU4Hr1G085830.4 | Barley | cytosol | 19.26 | 42.52 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 19.12 | 38.92 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 16.73 | 37.72 |
| HORVU5Hr1G046190.1 | Barley | plastid | 18.19 | 36.73 |
| HORVU4Hr1G023490.7 | Barley | endoplasmic reticulum, vacuole | 17.66 | 35.09 |
| HORVU1Hr1G051380.3 | Barley | cytosol | 20.05 | 32.13 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 17.66 | 31.29 |
| HORVU5Hr1G120960.2 | Barley | cytosol | 16.87 | 28.8 |
| HORVU6Hr1G068270.1 | Barley | cytosol | 16.2 | 26.46 |
| HORVU0Hr1G016660.4 | Barley | cytosol | 16.2 | 26.46 |
| HORVU7Hr1G008690.3 | Barley | endoplasmic reticulum, plasma membrane | 16.07 | 24.2 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.7 | MapMan:18.4.3.1.7 | Gene3D:3.30.200.20 | UniProt:A0A287IQ41 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:HORVU2Hr1G084400 | EnsemblPlants:HORVU2Hr1G084400.1 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF332 | InterPro:Prot_kinase_dom |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000B467CBA | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:-:611178205..611181657
Molecular Weight (calculated)
84255.6 Da
IEP (calculated)
6.211
GRAVY (calculated)
-0.727
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGRHGGYR DYEAREREPD AEAARRSQSL GDRHRSDADR RRDGGRSGGG REFSNGYGHR RSHPPKSRLS TRLGDREPGE VLSGSASDDS GGRSGRATGE
101: NIMSSSSREG EVAVGAPAAP SPSKKRKFSP IIWDRDSPKP PQLHPGAVAV KGVVESSSAD AASDQKVVQA ASAELPPPPP LPPQGHIPER LVVENSPMDV
201: DLAVDTEDTE QLHEPEDSKV LEVEESKVKE EEEIKVKEEE EYPTMRNIST SRWAGANDDD EEGVTLRKKK GISPADSAEL GQGKKTPSPE LGEVVTSDMS
301: GRRTISRSSD SGRMGNDDKE DLELGKGDYM DVDRGEASVN GSANRPSSDS EDEVRRSETP EPVKPAHRCI NMLQGCRSVD VFERLNKINE GTYGVVYRAK
401: DKKTAEIVAL KKVKMEKERE GFPLTSLREI NILLSFHHPS IVDVKEVVVG SSLDSIFMVM EYMEHDLKGV MEKMKQPYTQ SEVKCLMLQL LEGVKYLHDN
501: WVLHRDLKTS NLLLNNRGEL KICDFGLSRQ YGSPLKPYTQ LVVTLWYRSP ELLLGTKEYS TAIDMWSVGC IMAELLAKEP LFNGKTEFEQ LDKIFRTLGT
601: PNEKIWPGYA KLPGVKVNFV KQPYNRLRDK FPAASFSGRP NLSEAGFDLL NKLLTYDPAK RISAEVALEH PWFCEVPLPK SKDFMPTFPA LNELDRRTRR
701: YMKSPDPLEE QRLKELQDKR QPWPFWLSSN RLLGFLFVLT AMLQPESVRS DGF
101: NIMSSSSREG EVAVGAPAAP SPSKKRKFSP IIWDRDSPKP PQLHPGAVAV KGVVESSSAD AASDQKVVQA ASAELPPPPP LPPQGHIPER LVVENSPMDV
201: DLAVDTEDTE QLHEPEDSKV LEVEESKVKE EEEIKVKEEE EYPTMRNIST SRWAGANDDD EEGVTLRKKK GISPADSAEL GQGKKTPSPE LGEVVTSDMS
301: GRRTISRSSD SGRMGNDDKE DLELGKGDYM DVDRGEASVN GSANRPSSDS EDEVRRSETP EPVKPAHRCI NMLQGCRSVD VFERLNKINE GTYGVVYRAK
401: DKKTAEIVAL KKVKMEKERE GFPLTSLREI NILLSFHHPS IVDVKEVVVG SSLDSIFMVM EYMEHDLKGV MEKMKQPYTQ SEVKCLMLQL LEGVKYLHDN
501: WVLHRDLKTS NLLLNNRGEL KICDFGLSRQ YGSPLKPYTQ LVVTLWYRSP ELLLGTKEYS TAIDMWSVGC IMAELLAKEP LFNGKTEFEQ LDKIFRTLGT
601: PNEKIWPGYA KLPGVKVNFV KQPYNRLRDK FPAASFSGRP NLSEAGFDLL NKLLTYDPAK RISAEVALEH PWFCEVPLPK SKDFMPTFPA LNELDRRTRR
701: YMKSPDPLEE QRLKELQDKR QPWPFWLSSN RLLGFLFVLT AMLQPESVRS DGF
001: MAAGRNIRYP DHELRDQESN SRFSRRDSAY ANEDYNHVRN GAIDNGKGRV SNLRHGDRDR IKSGARQEEN KMVSSGFRLS KSNPGSREVF IDLGPKRCGF
101: SARSVDREPG ELSSESGSDD LIESESLAKV NGVVKEVENR AQSPVEKKRK FSPIVWDRDD HERSNLSRNE KPVEVTPLPP PPPLVKRSSQ SPSVSCGGNS
201: HYSPAKSDMH QDPVEVGVSA VSMPALSPSV EMSSLCVVEQ SSNAEQDDKQ EHATHLEEDE NMPTRHISSS RWAAGNSSPT DEVEIVEEVG EKKRRKKPFP
301: VQGRFRNTSQ TPEVGELVRE GYRSSDSDER GHHSLPGSRD DFEERDAVKS DKMEIDEEEH RRENSVDSLS ETDSDDEYVR HETPEPASTP LRSINMLQGC
401: RSVDEFERLN KIDEGTYGVV YRAKDKKTGE IVALKKVKME KEREGFPLTS LREINILLSF HHPSIVDVKE VVVGSSLDSI FMVMEYMEHD LKALMETMKQ
501: RFSQSEVKCL MLQLLEGVKY LHDNWVLHRD LKTSNLLLNN RGELKICDFG LARQYGSPLK PYTHLVVTLW YRAPELLLGA KQYSTAIDMW SLGCIMAELL
601: MKAPLFNGKT EFDQLDKIFR ILGTPNESIW PGFSKLPGVK VNFVKHQYNL LRKKFPATSF TGAPVLSDAG FDLLNKLLTY DPERRITVNE ALKHDWFREV
701: PLPKSKDFMP TFPAQHAQDR RGRRMVKSPD PLEEQRRKEL TQTELGSGGL FG
101: SARSVDREPG ELSSESGSDD LIESESLAKV NGVVKEVENR AQSPVEKKRK FSPIVWDRDD HERSNLSRNE KPVEVTPLPP PPPLVKRSSQ SPSVSCGGNS
201: HYSPAKSDMH QDPVEVGVSA VSMPALSPSV EMSSLCVVEQ SSNAEQDDKQ EHATHLEEDE NMPTRHISSS RWAAGNSSPT DEVEIVEEVG EKKRRKKPFP
301: VQGRFRNTSQ TPEVGELVRE GYRSSDSDER GHHSLPGSRD DFEERDAVKS DKMEIDEEEH RRENSVDSLS ETDSDDEYVR HETPEPASTP LRSINMLQGC
401: RSVDEFERLN KIDEGTYGVV YRAKDKKTGE IVALKKVKME KEREGFPLTS LREINILLSF HHPSIVDVKE VVVGSSLDSI FMVMEYMEHD LKALMETMKQ
501: RFSQSEVKCL MLQLLEGVKY LHDNWVLHRD LKTSNLLLNN RGELKICDFG LARQYGSPLK PYTHLVVTLW YRAPELLLGA KQYSTAIDMW SLGCIMAELL
601: MKAPLFNGKT EFDQLDKIFR ILGTPNESIW PGFSKLPGVK VNFVKHQYNL LRKKFPATSF TGAPVLSDAG FDLLNKLLTY DPERRITVNE ALKHDWFREV
701: PLPKSKDFMP TFPAQHAQDR RGRRMVKSPD PLEEQRRKEL TQTELGSGGL FG
Arabidopsis Description
Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.