Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G345200.4 | Wheat | nucleus | 97.38 | 97.38 |
| TraesCS2B01G364800.5 | Wheat | nucleus | 98.21 | 97.01 |
| HORVU2Hr1G084400.1 | Barley | nucleus | 94.63 | 91.24 |
| Os04t0488000-01 | Rice | nucleus | 80.99 | 82.82 |
| EES12419 | Sorghum | nucleus | 78.37 | 82.23 |
| Zm00001d003222_P016 | Maize | nucleus | 77.55 | 80.66 |
| Zm00001d025739_P006 | Maize | nucleus | 77.41 | 78.06 |
| GSMUA_Achr8P01120_001 | Banana | nucleus | 53.17 | 66.78 |
| TraesCS6A01G214100.1 | Wheat | nucleus | 59.09 | 63.56 |
| GSMUA_Achr8P08900_001 | Banana | nucleus | 56.47 | 63.17 |
| GSMUA_Achr5P25400_001 | Banana | nucleus | 59.64 | 62.03 |
| GSMUA_Achr11P... | Banana | nucleus | 58.4 | 60.74 |
| CDY01821 | Canola | nucleus | 56.61 | 58.97 |
| Bra004236.1-P | Field mustard | nucleus | 56.61 | 57.97 |
| CDX96081 | Canola | nucleus | 56.61 | 57.97 |
| VIT_01s0010g02550.t01 | Wine grape | nucleus | 58.95 | 56.76 |
| KRH58745 | Soybean | nucleus | 58.26 | 56.7 |
| KRH42643 | Soybean | nucleus | 57.99 | 56.51 |
| AT1G67580.1 | Thale cress | nucleus | 57.44 | 55.45 |
| KRH31446 | Soybean | nucleus | 56.61 | 55.39 |
| KRG97452 | Soybean | nucleus | 45.73 | 53.04 |
| PGSC0003DMT400044987 | Potato | nucleus | 57.85 | 52.7 |
| Solyc05g014760.2.1 | Tomato | nucleus | 57.3 | 51.42 |
| PGSC0003DMT400034649 | Potato | nucleus | 57.85 | 51.16 |
| TraesCS6A01G078200.1 | Wheat | cytosol | 19.01 | 47.1 |
| TraesCS5A01G521700.1 | Wheat | cytosol | 19.01 | 46.94 |
| TraesCS5A01G145500.1 | Wheat | cytosol | 17.91 | 42.76 |
| TraesCS7A01G248700.1 | Wheat | cytosol | 18.87 | 42.02 |
| TraesCS4A01G192300.1 | Wheat | cytosol | 17.77 | 41.75 |
| TraesCS1A01G198100.2 | Wheat | cytosol | 20.8 | 32.13 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 18.46 | 31.6 |
| TraesCS4A01G336800.2 | Wheat | cytosol | 17.63 | 28.76 |
| TraesCS6A01G269400.1 | Wheat | cytosol | 16.53 | 26.09 |
| TraesCS4A01G434800.1 | Wheat | cytosol | 16.25 | 24.38 |
| TraesCS7A01G049000.1 | Wheat | cytosol | 16.12 | 23.78 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.7 | MapMan:18.4.3.1.7 | Gene3D:3.30.200.20 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24056 | PANTHER:PTHR24056:SF332 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EnsemblPlantsGene:TraesCS2A01G346500 | EnsemblPlants:TraesCS2A01G346500.1 | TIGR:cd07843 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:+:585136287..585139609
Molecular Weight (calculated)
80881.6 Da
IEP (calculated)
6.648
GRAVY (calculated)
-0.732
Length
726 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGRHGGYR DYEAREREPD AEAARRSQSL GGRHRSDADR RRDGVRSSGG REFSNGYGHR RSHPPKSRLS TRLGDREPGE VLSGSASDDS GGRSGRAAGE
101: NTMSSSSREG EVAVGAPAAP SPSKKRKFSP IIWDRDSPKP PSLHSGTVTL KGVVDSASAD TASDKKVVES SSAQLPPPPP LPPQGHIPER LVVDNSPMDV
201: DLAVDTDNTE QLHVLQDSKV LEVEESKVKE EEESKVKEEE EYPTMRNIST SRWAGANDDD EEGVTLRKKK VLSPADSAEL GQGKKTPTPE LGEVVTSDMS
301: GRRTMSRSSD SGRMGNDEKE DLELGKGDYM DVDRGEASVN GSANLLSSDS EDEVRRSETP EPVKPAHRCI NMLQGCRSVD VFERLNKINE GTYGVVYRAK
401: DKKTAEIVAL KKVKMEKERE GFPLTSLREI NILLSFHHPS IVDVKEVVVG SSLDSIFMVM EYMEHDLKGV METMKQPYTQ SEVKCLMLQL LEGVKYLHDN
501: WVLHRDLKTS NLLLNNRGEL KICDFGLSRQ YGSPLKPYTQ LVVTLWYRSP ELLLGTKEYS TAIDMWSVGC IMAELLAKEP LFNGKTEFEQ LDKIFRTLGT
601: PNEKIWPGYA KLPGVKVNFV KQPYNRLRDK FPAASFSGRP NLSEAGFDLL NKLLTYDPAK RISAEAALEH PWFSEVPLPK SKDFMPTFPA LNELDRRTRR
701: YMKSPDPLEE QRLKELQAKG NRGLFG
101: NTMSSSSREG EVAVGAPAAP SPSKKRKFSP IIWDRDSPKP PSLHSGTVTL KGVVDSASAD TASDKKVVES SSAQLPPPPP LPPQGHIPER LVVDNSPMDV
201: DLAVDTDNTE QLHVLQDSKV LEVEESKVKE EEESKVKEEE EYPTMRNIST SRWAGANDDD EEGVTLRKKK VLSPADSAEL GQGKKTPTPE LGEVVTSDMS
301: GRRTMSRSSD SGRMGNDEKE DLELGKGDYM DVDRGEASVN GSANLLSSDS EDEVRRSETP EPVKPAHRCI NMLQGCRSVD VFERLNKINE GTYGVVYRAK
401: DKKTAEIVAL KKVKMEKERE GFPLTSLREI NILLSFHHPS IVDVKEVVVG SSLDSIFMVM EYMEHDLKGV METMKQPYTQ SEVKCLMLQL LEGVKYLHDN
501: WVLHRDLKTS NLLLNNRGEL KICDFGLSRQ YGSPLKPYTQ LVVTLWYRSP ELLLGTKEYS TAIDMWSVGC IMAELLAKEP LFNGKTEFEQ LDKIFRTLGT
601: PNEKIWPGYA KLPGVKVNFV KQPYNRLRDK FPAASFSGRP NLSEAGFDLL NKLLTYDPAK RISAEAALEH PWFSEVPLPK SKDFMPTFPA LNELDRRTRR
701: YMKSPDPLEE QRLKELQAKG NRGLFG
001: MAAGGVDVSR SSVAVKKDYD FYRNGSRDVY VRQSGRDDER RQIKRPSDHD LRRNDGRHRS RLAYEKGELR EEAEVQRPSE KRRKFSPIVW NAEKVGRAPS
101: REKTKSPFPV PTTTVISNQA VAGKTTSNDQ VNALMSPEPS YLAPVQPSEA LLAVKHPVDD LEEGQLEEEQ VMQEDVKEGL LEEEQVMQEP NIKTSRWGTG
201: LTSPKEELIS VNVSKTNRWN RSSLTPECEE VMVSEEQQCY SSGSGSGHLS VEKLSADGNS GREYYSSDHD ELEHEDQDSL TPGEMNMMFG SRSVNEFQKL
301: NKINEGTYGI VYKARDEKTK EIVALKKIKM KEDRFEEEYG FPLTSLREIN ILLSCNHPAI VNVKEVVVGG KNDNDVYMVM EHLEHDLRGV MDRRKEPFST
401: SEVKCLMMQL LDGLKYLHTN WIIHRDLKPS NLLMNNCGEL KICDFGMARQ YGSPIKPYTQ MVITQWYRPP ELLLGAKEYS TAVDMWSVGC IMAELLSQKP
501: LFPGKSELDQ LQKIFAVLGT PNEAIWPGFS SFPNAKAKFP TQPYNMLRKK FPAISFVGGQ ILSERGFDLL NSLLTLDPEK RLTVEDALNH GWFHEVPLPK
601: SKDFMPTYPP KR
101: REKTKSPFPV PTTTVISNQA VAGKTTSNDQ VNALMSPEPS YLAPVQPSEA LLAVKHPVDD LEEGQLEEEQ VMQEDVKEGL LEEEQVMQEP NIKTSRWGTG
201: LTSPKEELIS VNVSKTNRWN RSSLTPECEE VMVSEEQQCY SSGSGSGHLS VEKLSADGNS GREYYSSDHD ELEHEDQDSL TPGEMNMMFG SRSVNEFQKL
301: NKINEGTYGI VYKARDEKTK EIVALKKIKM KEDRFEEEYG FPLTSLREIN ILLSCNHPAI VNVKEVVVGG KNDNDVYMVM EHLEHDLRGV MDRRKEPFST
401: SEVKCLMMQL LDGLKYLHTN WIIHRDLKPS NLLMNNCGEL KICDFGMARQ YGSPIKPYTQ MVITQWYRPP ELLLGAKEYS TAVDMWSVGC IMAELLSQKP
501: LFPGKSELDQ LQKIFAVLGT PNEAIWPGFS SFPNAKAKFP TQPYNMLRKK FPAISFVGGQ ILSERGFDLL NSLLTLDPEK RLTVEDALNH GWFHEVPLPK
601: SKDFMPTYPP KR
Arabidopsis Description
CDKG1Cyclin-dependent kinase G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.