Factsheet for GSMUA_Achr5P25400_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...	nucleus
GSMUA_Achr10P...	nucleus
GSMUA_Achr11P...
GSMUA_Achr11P...	nucleus
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...	nucleus
GSMUA_Achr11P...
GSMUA_Achr1P00900_001	nucleus
GSMUA_Achr1P01580_001
GSMUA_Achr1P09660_001
GSMUA_Achr1P20410_001	nucleus
GSMUA_Achr2P00230_001
GSMUA_Achr2P04990_001
GSMUA_Achr2P11790_001	nucleus
GSMUA_Achr3P06730_001	nucleus
GSMUA_Achr4P06650_001
GSMUA_Achr4P13630_001
GSMUA_Achr4P24050_001
GSMUA_Achr4P26490_001	nucleus
GSMUA_Achr5P12920_001	nucleus
GSMUA_Achr5P17920_001	nucleus
GSMUA_Achr5P20430_001	nucleus
GSMUA_Achr5P21770_001	nucleus
GSMUA_Achr5P22980_001	nucleus
GSMUA_Achr6P00410_001
GSMUA_Achr6P02210_001	nucleus
GSMUA_Achr6P36640_001	nucleus
GSMUA_Achr7P02600_001
GSMUA_Achr7P12850_001	nucleus
GSMUA_Achr7P19040_001	nucleus
GSMUA_Achr8P06830_001
GSMUA_Achr8P12510_001	nucleus
GSMUA_Achr8P12630_001
GSMUA_Achr8P23430_001	nucleus
GSMUA_Achr9P15070_001	nucleus
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G67580.1	GSMUA_Achr7P02600_001	AT1G09760.1	20706207
AT1G67580.1	GSMUA_Achr1P09660_001	AT1G23860.1	20706207
AT1G67580.1	GSMUA_AchrUn_...	AT1G23860.1	20706207
AT1G67580.1	GSMUA_Achr11P...	AT1G61870.1	20706207
AT1G67580.1	GSMUA_Achr6P00410_001	AT1G61870.1	20706207
AT1G67580.1	GSMUA_Achr10P...	AT2G18740.1	20706207
AT1G67580.1	GSMUA_Achr11P...	AT2G18740.1	20706207
AT1G67580.1	GSMUA_Achr2P04990_001	AT2G18740.1	20706207
AT1G67580.1	GSMUA_Achr8P06830_001	AT2G26430.1	20706207
AT1G67580.1	GSMUA_Achr11P...	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr11P...	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr1P00900_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr1P20410_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr2P11790_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr4P26490_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr5P12920_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr5P20430_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr5P21770_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr6P36640_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr8P12510_001	AT2G32710.1	20407024
AT1G67580.1	GSMUA_Achr11P...	AT2G33340.1	20706207
AT1G67580.1	GSMUA_Achr8P12630_001	AT2G33340.1	20706207
AT1G67580.1	GSMUA_Achr11P...	AT2G46610.1	20706207
AT1G67580.1	GSMUA_Achr11P...	AT2G47640.1	20706207
AT1G67580.1	GSMUA_Achr11P...	AT2G47640.1	20706207
AT1G67580.1	GSMUA_Achr2P00230_001	AT2G47640.1	20706207
AT1G67580.1	GSMUA_Achr4P06650_001	AT3G04620.1	20706207
AT1G67580.1	GSMUA_Achr4P13630_001	AT3G04620.1	20706207
AT1G67580.1	GSMUA_Achr1P01580_001	AT3G16980.1	20706207
AT1G67580.1	GSMUA_Achr4P24050_001	AT3G16980.1	20706207
AT1G67580.1	GSMUA_Achr11P...	AT3G62840.1	20706207
AT1G67580.1	GSMUA_Achr11P...	AT3G62840.1	20706207
AT1G67580.1	GSMUA_Achr2P00230_001	AT3G62840.1	20706207
AT1G67580.1	GSMUA_AchrUn_...	AT4G25550.1	20706207
AT1G67580.1	GSMUA_Achr10P...	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr10P...	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr3P06730_001	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr5P17920_001	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr5P22980_001	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr6P02210_001	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr7P12850_001	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr7P19040_001	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr8P23430_001	AT5G10440.1	20407024
AT1G67580.1	GSMUA_Achr9P15070_001	AT5G10440.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P01120_001	Banana	nucleus	68.91	83.22
GSMUA_Achr8P08900_001	Banana	nucleus	75.36	81.05
GSMUA_Achr11P...	Banana	nucleus	77.94	77.94
EES12419	Sorghum	nucleus	61.32	61.85
VIT_01s0010g02550.t01	Wine grape	nucleus	66.62	61.67
KRH58745	Soybean	nucleus	65.62	61.39
Zm00001d003222_P016	Maize	nucleus	61.17	61.17
KRH42643	Soybean	nucleus	65.04	60.94
Os04t0488000-01	Rice	nucleus	61.6	60.56
Bra004236.1-P	Field mustard	nucleus	61.46	60.51
CDX96081	Canola	nucleus	61.46	60.51
CDY01821	Canola	nucleus	60.32	60.4
TraesCS2A01G346500.1	Wheat	nucleus	62.03	59.64
TraesCS2D01G345200.4	Wheat	nucleus	61.89	59.5
KRH31446	Soybean	nucleus	62.75	59.03
Zm00001d025739_P006	Maize	nucleus	60.89	59.03
AT1G67580.1	Thale cress	nucleus	63.47	58.91
TraesCS2B01G364800.5	Wheat	nucleus	61.89	58.78
PGSC0003DMT400044987	Potato	nucleus	64.9	56.84
EES05381	Sorghum	nucleus	54.73	56.59
TraesCS6B01G244100.1	Wheat	nucleus	54.15	56.5
HORVU2Hr1G084400.1	Barley	nucleus	60.89	56.44
Zm00001d017128_P002	Maize	nucleus	53.58	56.33
TraesCS6A01G214100.1	Wheat	nucleus	54.44	56.3
TraesCS6D01G196700.1	Wheat	nucleus	54.15	56.0
Os02t0602100-02	Rice	nucleus	55.16	55.56
HORVU6Hr1G054600.5	Barley	nucleus	54.01	55.52
Solyc05g014760.2.1	Tomato	nucleus	63.61	54.88
PGSC0003DMT400034649	Potato	nucleus	64.33	54.69
KRG97452	Soybean	nucleus	48.71	54.31
GSMUA_Achr11P...	Banana	cytosol	20.06	47.62
GSMUA_Achr4P04710_001	Banana	cytosol	19.77	46.94
GSMUA_Achr11P...	Banana	cytosol	18.62	46.26
GSMUA_Achr3P03700_001	Banana	cytosol	19.77	45.7
GSMUA_Achr8P00030_001	Banana	cytosol	19.63	44.48
GSMUA_Achr3P26790_001	Banana	cytosol	16.91	44.36
GSMUA_Achr11P...	Banana	cytosol	18.48	42.57
GSMUA_Achr11P...	Banana	cytosol	19.63	41.02
GSMUA_Achr4P04700_001	Banana	cytosol, extracellular	18.48	40.95
GSMUA_Achr9P12350_001	Banana	cytosol	18.62	40.37
GSMUA_Achr4P02420_001	Banana	cytosol	13.75	39.83
GSMUA_Achr11P...	Banana	cytosol	21.49	32.19
GSMUA_Achr5P18030_001	Banana	cytosol	20.63	30.84
GSMUA_Achr2P17970_001	Banana	cytosol	17.19	30.15
GSMUA_Achr11P...	Banana	mitochondrion	18.05	29.37
GSMUA_Achr7P04820_001	Banana	cytosol	16.05	28.43
GSMUA_Achr3P09020_001	Banana	cytosol	19.2	28.39
GSMUA_Achr8P00940_001	Banana	cytosol	17.77	27.56
GSMUA_Achr9P17590_001	Banana	cytosol	19.05	26.55
GSMUA_Achr1P15530_001	Banana	cytosol	17.05	25.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.7	MapMan:18.4.3.1.7	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr5G25400_001	EnsemblPlants:GSMUA_Achr5P25400_001	EnsemblPlants:GSMUA_Achr5T25400_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T1L5
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF332	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294E197	SEG:seg	:

Description

Cyclin-dependent kinase G-2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G25400_001]

Coordinates

chr5:-:26425645..26429003

Molecular Weight (calculated)

79074.7 Da

IEP (calculated)

5.450

GRAVY (calculated)

-0.820

Length

698 amino acids

Sequence
(BLAST)

001: MAAGRYGGYR DHEFRDREAD VENSSRRDYY QGRVREGGRD RDRGRSDRDV RDRVSASQRD ITETKSVNGS YRSPMSSNSS GGSGHIQKMS HLSERDVDRE
101: TGELSSGSGS DDAEAPVSKI RENGIQNQEI DDVSMPVRKR KFSPIIWDRD DNKKSSVSTP RSKISKVEDV TLPPPPPLPQ GFVPPQEQSE NNNQEATLVD
201: EYYEEPAPAR SISFSRWADG NSALDDEEDE LKEDDAQKRK KTNPLSNTAG QQLLKKSPTP ELGEVIVRQN SSGALSKLFD SEGEHADRDQ EVEVDGSDYM
301: DVDRDESNAE TSDQLSDTDF DAEDHRSKTP EAAQTPQRSI NMLQGCRSVD EFERLNKIDE GTYGVVYRAK DKKTGEIVAL KKVKMEKERE GFPLTSLREI
401: NILLSFHHPS IVDVKEVVVG SSLDSIFMAM EYMEHDLKGL METMKQPFSQ SEVKCLMLQL FSGVKYLHDN WVLHRDLKTS NLLLNNRGEL KICDFGLSRQ
501: YGSPLKPYTH LVVTLWYRAP ELLLGAKEYS TAIDMWSLGC IMAELLAKEP LFSGKTEFDQ LDKIFRTLGT PNEKIWPGFA KLPGVKVNFV KQPYNKLREK
601: FPPTSFSGRP TLSEAGFDLL NKLLTYDPEK RITAEAALNH HWFCEVPLPK SKEFMPTFPA QHAQDRRLRR IMKSPDPLAE QRKKELQQGE LGLSSLFG

Best Arabidopsis Sequence Match ( AT1G67580.2 )
(BLAST)

001: MAAGRNIRYP DHELRDQESN SRFSRRDSAY ANEDYNHVRN GAIDNGKGRV SNLRHGDRDR IKSGARQEEN KMVSSGFRLS KSNPGSREVF IDLGPKRCGF
101: SARSVDREPG ELSSESGSDD LIESESLAKV NGVVKEVENR AQSPVEKKRK FSPIVWDRDD HERSNLSRNE KPVEVTPLPP PPPLVKRSSQ SPSVSCGGNS
201: HYSPAKSDMH QDPVEVGVSA VSMPALSPSV EMSSLCVVEQ SSNAEQDDKQ EHATHLEEDE NMPTRHISSS RWAAGNSSPT DEVEIVEEVG EKKRRKKPFP
301: VQGRFRNTSQ TPEVGELVRE GYRSSDSDER GHHSLPGSRD DFEERDAVKS DKMEIDEEEH RRENSVDSLS ETDSDDEYVR HETPEPASTP LRSINMLQGC
401: RSVDEFERLN KIDEGTYGVV YRAKDKKTGE IVALKKVKME KEREGFPLTS LREINILLSF HHPSIVDVKE VVVGSSLDSI FMVMEYMEHD LKALMETMKQ
501: RFSQSEVKCL MLQLLEGVKY LHDNWVLHRD LKTSNLLLNN RGELKICDFG LARQYGSPLK PYTHLVVTLW YRAPELLLGA KQYSTAIDMW SLGCIMAELL
601: MKAPLFNGKT EFDQLDKIFR ILGTPNESIW PGFSKLPGVK VNFVKHQYNL LRKKFPATSF TGAPVLSDAG FDLLNKLLTY DPERRITVNE ALKHDWFREV
701: PLPKSKDFMP TFPAQHAQDR RGRRMVKSPD PLEEQRRKEL TQTELGSGGL FG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAG1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.