CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX69832	nucleus
CDX74179
CDX76666
CDX79470	nucleus
CDX79500
CDX81436
CDX84726	nucleus
CDX84949
CDX86852
CDX89414
CDX92717
CDX93483
CDX94441
CDX94952
CDX97009	nucleus
CDX99562
CDY03883
CDY06372
CDY07260
CDY12181	nucleus
CDY13008
CDY17165
CDY19160	nucleus
CDY19484
CDY20674
CDY21118
CDY22621
CDY22958
CDY23752
CDY23793	nucleus
CDY25328
CDY27590
CDY28657
CDY29245
CDY30010
CDY31066
CDY37731
CDY40664
CDY41887
CDY47165
CDY47646
CDY49311
CDY50198
CDY50744
CDY51595
CDY52363
CDY52576
CDY53532
CDY54086
CDY59084
CDY59607
CDY59640	nucleus
CDY68615

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G67580.1	CDX93483	AT1G09760.1	20706207
AT1G67580.1	CDX94952	AT1G09760.1	20706207
AT1G67580.1	CDY06372	AT1G09760.1	20706207
AT1G67580.1	CDY20674	AT1G09760.1	20706207
AT1G67580.1	CDY22621	AT1G09760.1	20706207
AT1G67580.1	CDY31066	AT1G09760.1	20706207
AT1G67580.1	CDY47646	AT1G23860.1	20706207
AT1G67580.1	CDY59084	AT1G23860.1	20706207
AT1G67580.1	CDY07260	AT1G61870.1	20706207
AT1G67580.1	CDY25328	AT1G61870.1	20706207
AT1G67580.1	CDY47165	AT1G61870.1	20706207
AT1G67580.1	CDY13008	AT2G18740.1	20706207
AT1G67580.1	CDY29245	AT2G18740.1	20706207
AT1G67580.1	CDY49311	AT2G18740.1	20706207
AT1G67580.1	CDY52576	AT2G18740.1	20706207
AT1G67580.1	CDY59607	AT2G18740.1	20706207
AT1G67580.1	CDX84949	AT2G26430.1	20706207
AT1G67580.1	CDY03883	AT2G26430.1	20706207
AT1G67580.1	CDY27590	AT2G26430.1	20706207
AT1G67580.1	CDY51595	AT2G26430.1	20706207
AT1G67580.1	CDX79470	AT2G32710.1	20407024
AT1G67580.1	CDX84726	AT2G32710.1	20407024
AT1G67580.1	CDY12181	AT2G32710.1	20407024
AT1G67580.1	CDY19160	AT2G32710.1	20407024
AT1G67580.1	CDY23793	AT2G32710.1	20407024
AT1G67580.1	CDY59640	AT2G32710.1	20407024
AT1G67580.1	CDY17165	AT2G33340.1	20706207
AT1G67580.1	CDY19484	AT2G33340.1	20706207
AT1G67580.1	CDY23752	AT2G33340.1	20706207
AT1G67580.1	CDY37731	AT2G33340.1	20706207
AT1G67580.1	CDX81436	AT2G46610.1	20706207
AT1G67580.1	CDY22958	AT2G46610.1	20706207
AT1G67580.1	CDX76666	AT2G47640.1	20706207
AT1G67580.1	CDX74179	AT3G04620.1	20706207
AT1G67580.1	CDX79500	AT3G04620.1	20706207
AT1G67580.1	CDY21118	AT3G04620.1	20706207
AT1G67580.1	CDY28657	AT3G04620.1	20706207
AT1G67580.1	CDY30010	AT3G04620.1	20706207
AT1G67580.1	CDY40664	AT3G04620.1	20706207
AT1G67580.1	CDY41887	AT3G04620.1	20706207
AT1G67580.1	CDY50744	AT3G04620.1	20706207
AT1G67580.1	CDY53532	AT3G04620.1	20706207
AT1G67580.1	CDY68615	AT3G04620.1	20706207
AT1G67580.1	CDX86852	AT3G16980.1	20706207
AT1G67580.1	CDX99562	AT3G16980.1	20706207
AT1G67580.1	CDX76666	AT3G62840.1	20706207
AT1G67580.1	CDX89414	AT4G25550.1	20706207
AT1G67580.1	CDX92717	AT4G25550.1	20706207
AT1G67580.1	CDX94441	AT4G25550.1	20706207
AT1G67580.1	CDY50198	AT4G25550.1	20706207
AT1G67580.1	CDY52363	AT4G25550.1	20706207
AT1G67580.1	CDY54086	AT4G25550.1	20706207
AT1G67580.1	CDX69832	AT5G10440.1	20407024
AT1G67580.1	CDX97009	AT5G10440.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004236.1-P	Field mustard	nucleus	95.98	94.36
CDX96081	Canola	nucleus	95.98	94.36
AT1G67580.1	Thale cress	nucleus	86.08	79.79
CDY45733	Canola	cytosol, plastid, vacuole	15.78	72.37
CDY69065	Canola	cytosol	15.64	71.71
GSMUA_Achr8P01120_001	Banana	nucleus	52.65	63.49
KRH58745	Soybean	nucleus	66.57	62.2
KRH42643	Soybean	nucleus	66.14	61.88
VIT_01s0010g02550.t01	Wine grape	nucleus	66.86	61.8
GSMUA_Achr8P08900_001	Banana	nucleus	56.81	61.02
GSMUA_Achr5P25400_001	Banana	nucleus	60.4	60.32
KRH31446	Soybean	nucleus	63.56	59.7
EES12419	Sorghum	nucleus	58.39	58.81
GSMUA_Achr11P...	Banana	nucleus	58.39	58.31
Os04t0488000-01	Rice	nucleus	58.97	57.89
Zm00001d003222_P016	Maize	nucleus	57.96	57.88
TraesCS2D01G345200.4	Wheat	nucleus	59.25	56.89
TraesCS2A01G346500.1	Wheat	nucleus	58.97	56.61
KRG97452	Soybean	nucleus	50.65	56.39
Zm00001d025739_P006	Maize	nucleus	58.11	56.25
TraesCS2B01G364800.5	Wheat	nucleus	59.11	56.05
PGSC0003DMT400044987	Potato	nucleus	62.27	54.45
Os02t0602100-02	Rice	nucleus	53.95	54.26
HORVU2Hr1G084400.1	Barley	nucleus	58.39	54.05
TraesCS6B01G244100.1	Wheat	nucleus	51.22	53.36
TraesCS6A01G214100.1	Wheat	nucleus	51.65	53.33
Solyc05g014760.2.1	Tomato	nucleus	61.84	53.28
EES05381	Sorghum	nucleus	51.51	53.19
Zm00001d017128_P002	Maize	nucleus	50.5	53.01
TraesCS6D01G196700.1	Wheat	nucleus	50.93	52.59
PGSC0003DMT400034649	Potato	nucleus	61.84	52.5
HORVU6Hr1G054600.5	Barley	nucleus	50.79	52.14
CDY37922	Canola	nucleus	36.87	48.49
CDY56886	Canola	nucleus	34.86	47.46
CDX68497	Canola	cytosol	19.94	47.28
CDY31856	Canola	cytosol	20.52	45.25
CDY01345	Canola	cytosol	20.52	45.25
CDX87588	Canola	cytosol	20.23	45.05
CDX88294	Canola	cytosol	20.23	45.05
CDX83047	Canola	cytosol	19.94	44.55
CDY13189	Canola	cytosol	19.23	44.08
CDX76164	Canola	cytosol	19.23	44.08
CDX87018	Canola	cytosol	14.92	43.88
CDY07716	Canola	cytosol	19.08	43.04
CDY62439	Canola	cytosol, nucleus, plasma membrane	19.08	42.9
CDY66197	Canola	cytosol	20.23	41.72
CDX96131	Canola	cytosol	19.51	39.19
CDY36228	Canola	cytosol	19.51	39.19
CDY05870	Canola	cytosol, plastid	20.52	37.73
CDX96739	Canola	cytosol	20.23	35.88
CDX83876	Canola	cytosol	20.09	35.44
CDY60132	Canola	cytosol	19.94	35.01
CDY21722	Canola	cytosol	19.51	34.96
CDX81858	Canola	cytosol	19.51	34.96
CDX87784	Canola	cytosol	13.2	34.59
CDX73001	Canola	cytosol	19.37	34.01
CDY60036	Canola	cytosol	20.52	30.56
CDX81189	Canola	cytosol, nucleus, plastid	18.51	29.66
CDY67496	Canola	cytosol	12.91	28.48
CDY38979	Canola	cytosol	17.5	27.85
CDY49306	Canola	cytosol	18.36	26.78
CDY39427	Canola	cytosol	17.65	25.62
CDX76497	Canola	cytosol	16.93	25.6
CDY01580	Canola	cytosol	16.79	25.38
CDY09272	Canola	cytosol	16.79	25.38
CDY13047	Canola	cytosol	16.93	25.38
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	17.79	22.02
CDX87783	Canola	extracellular, mitochondrion	0.57	3.39
CDY26373	Canola	mitochondrion	0.43	3.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.7	MapMan:18.4.3.1.7	Gene3D:3.30.200.20	GO:A0A078EKY7	EnsemblPlants:CDY01821
ProteinID:CDY01821	ProteinID:CDY01821.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00112980001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF332
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF3337	SEG:seg

Description

BnaC06g28610D

Coordinates

chrLK031929:-:556130..559875

Molecular Weight (calculated)

78309.5 Da

IEP (calculated)

6.429

GRAVY (calculated)

-0.722

Length

697 amino acids

Sequence
(BLAST)

001: MTAGRNIRYP DHELRGRQES NSRFSRRDSV YSNESCMIRS GAVNSREAFV DRGPKRCGLS VSASSVDREP GELSSESGSD ESESVVKGNG DVKQVDNRAQ
101: SPVEKKRKFS PIVWDRDEKP LEATPLPPPP PLVKRSSQSP SVNTVGNSPF PPKQSSMHED PKQVGLLEVS APTLPSPVEI SSSCVVEQSS NAGKDGKQED
201: ATHQDEEENM PTRHISSSRW AAGNSSPTDE GEIVELEIDK RRKKLLQGRL PNKSLTPEAG ESVREGCTSS DSDERRHHSL PGSRDDFEEK TAVKGDYMEI
301: DEGERRRGNT SDSLTETDSD DEYVRHETPE PAGPPLRSIN MLQGCRSVDE FERLNKIDEG TYGVVYRAKD KKTGEIVALK KVKMEKEREG FPLTALREIN
401: ILLSFHHPSI VDVKEVVVGS SLDSIFMVME YMEHDLKALM ETMKQRFSQS EVKCLMLQLL EGVKYLHDNW VLHRDLKTSN LLLNNRGELK ICDFGLARQY
501: GSPLKPYTHL VVTLWYRAPE LLLGAKQYST AIDMWSLGCI MAELLAKAPL FNGKTEFDQL DKIFRVLGTP NESIWPGFSK LPGVKVNFVK HQYNLLRKKF
601: PATSFTGSPT LSDAGFDLLN KLLTYDPERR ITVDDALKHE WFSEVPLPKS KDFMPTFPAQ NSQDRRGRRM IKSPDPLQEQ HRKDLSQTEL GSGGLFG

Best Arabidopsis Sequence Match ( AT1G67580.2 )
(BLAST)

001: MAAGRNIRYP DHELRDQESN SRFSRRDSAY ANEDYNHVRN GAIDNGKGRV SNLRHGDRDR IKSGARQEEN KMVSSGFRLS KSNPGSREVF IDLGPKRCGF
101: SARSVDREPG ELSSESGSDD LIESESLAKV NGVVKEVENR AQSPVEKKRK FSPIVWDRDD HERSNLSRNE KPVEVTPLPP PPPLVKRSSQ SPSVSCGGNS
201: HYSPAKSDMH QDPVEVGVSA VSMPALSPSV EMSSLCVVEQ SSNAEQDDKQ EHATHLEEDE NMPTRHISSS RWAAGNSSPT DEVEIVEEVG EKKRRKKPFP
301: VQGRFRNTSQ TPEVGELVRE GYRSSDSDER GHHSLPGSRD DFEERDAVKS DKMEIDEEEH RRENSVDSLS ETDSDDEYVR HETPEPASTP LRSINMLQGC
401: RSVDEFERLN KIDEGTYGVV YRAKDKKTGE IVALKKVKME KEREGFPLTS LREINILLSF HHPSIVDVKE VVVGSSLDSI FMVMEYMEHD LKALMETMKQ
501: RFSQSEVKCL MLQLLEGVKY LHDNWVLHRD LKTSNLLLNN RGELKICDFG LARQYGSPLK PYTHLVVTLW YRAPELLLGA KQYSTAIDMW SLGCIMAELL
601: MKAPLFNGKT EFDQLDKIFR ILGTPNESIW PGFSKLPGVK VNFVKHQYNL LRKKFPATSF TGAPVLSDAG FDLLNKLLTY DPERRITVNE ALKHDWFREV
701: PLPKSKDFMP TFPAQHAQDR RGRRMVKSPD PLEEQRRKEL TQTELGSGGL FG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAG1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.