CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040393.1-P	Field mustard	cytosol	100.0	100.0
CDY41887	Canola	cytosol	99.34	99.34
CDY21118	Canola	cytosol	92.76	90.38
CDY30010	Canola	cytosol	92.11	88.05
CDX74179	Canola	cytosol	89.47	82.93
AT3G04620.1	Thale cress	cytosol	89.47	82.93
CDY40664	Canola	cytosol	82.89	78.26
CDX86203	Canola	cytosol	74.34	72.9
CDY57017	Canola	cytosol, nucleus, plastid	57.89	71.54
CDY00026	Canola	cytosol, nucleus, plastid	57.89	71.54
KRH34103	Soybean	plastid	59.21	68.18
KRG92697	Soybean	plastid	59.21	68.18
CDY63142	Canola	nucleus	52.63	61.54
CDY17226	Canola	nucleus	52.63	61.54
CDY50785	Canola	cytosol, nucleus, plastid	51.32	60.0
CDY43326	Canola	cytosol, nucleus, plastid	50.66	59.23
CDX90176	Canola	nucleus	50.66	59.23
CDY15644	Canola	cytosol, endoplasmic reticulum, nucleus	50.0	58.46
CDY15643	Canola	cytosol, endoplasmic reticulum, nucleus	50.0	58.46
CDX99800	Canola	cytosol, nucleus, plastid	50.0	58.46
CDX94654	Canola	cytosol, endoplasmic reticulum, nucleus	50.0	58.46
KRH68751	Soybean	plastid	51.97	57.25
KRG96999	Soybean	nucleus	47.37	55.81
PGSC0003DMT400070712	Potato	plastid	59.21	55.56
GSMUA_Achr4P13630_001	Banana	cytosol	48.68	55.22
Solyc01g097050.2.1	Tomato	unclear	59.87	55.15
GSMUA_Achr4P06650_001	Banana	cytosol	52.63	54.05
CDX79500	Canola	cytosol	58.55	50.28
CDY28657	Canola	mitochondrion	64.47	49.25
Os12t0489300-01	Rice	plasma membrane	49.34	44.38
CDY68615	Canola	nucleus, plastid	61.84	43.93
TraesCS3A01G439300.1	Wheat	nucleus	51.32	41.27
TraesCS3B01G473200.1	Wheat	nucleus	51.32	41.27
TraesCS3D01G432100.1	Wheat	nucleus	50.66	40.74
HORVU3Hr1G095800.1	Barley	nucleus	50.66	40.74
EES17034	Sorghum	nucleus	48.03	38.42
Zm00001d023639_P002	Maize	cytosol	48.03	35.78
CDY53532	Canola	nucleus	51.32	33.05

Protein Annotations

EnsemblPlants:CDY50744	EnsemblPlantsGene:GSBRNA2T00097428001	Gene3D:3.30.110.20	GO:A0A078IMV4	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:Alba-like_dom_sf	InterPro:DNA/RNA-bd_Alba-like	InterPro:IPR036882	InterPro:UCP030333_Alba	PANTHER:PTHR31947
PANTHER:PTHR31947:SF5	PFAM:PF01918	PIRSF:PIRSF030333	ProteinID:CDY50744	ProteinID:CDY50744.1	SEG:seg
SUPFAM:SSF82704	UniParc:UPI000253EC94	UniProt:A0A078IMV4	MapMan:15.3.7.2.1	:	:

Description

BnaAnng10510DBnaAnng10510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMV4]

Coordinates

chrLK032937:-:7805..8928

Molecular Weight (calculated)

16461.0 Da

IEP (calculated)

6.548

GRAVY (calculated)

-0.199

Length

152 amino acids

Sequence
(BLAST)

001: MAMEVATPAP APINAPERNI ILAPATVETH KKNRIQVSNT KKPLFFYVNL AKRYMQQHNE VELSALGMAI TTVVTISEIL KNNGLATEKK VLTSTVGMKD
101: ETKGRMIEIV LGKSDKFDSL VPPVTNGKTP EEVAKAETEA AVEVQEAAAT EA

Best Arabidopsis Sequence Match ( AT3G04620.1 )
(BLAST)

001: MAMEVATPAP APIPSERNIV LAPATTTTTA TVETHKKNRI QVSNTKKPLF FYVNLAKRYI QQHNEVELSA LGMAITTVVT ISEILKNNGL ATEKKVLTST
101: VGMKDETKGK MVQKAKIEIV LGKSDKFDSL VPPVTNGKTP EEEASAETEA SVEAQEEVAA ATEV

Arabidopsis Description

Alba DNA/RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q9SR12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.