Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040393.1-P | Field mustard | cytosol | 82.93 | 89.47 |
| CDY41887 | Canola | cytosol | 82.93 | 89.47 |
| CDY50744 | Canola | cytosol | 82.93 | 89.47 |
| CDY21118 | Canola | cytosol | 82.32 | 86.54 |
| CDY30010 | Canola | cytosol | 81.71 | 84.28 |
| Bra001110.1-P | Field mustard | cytosol | 84.15 | 84.15 |
| CDX74179 | Canola | cytosol | 84.15 | 84.15 |
| CDY40664 | Canola | cytosol | 80.49 | 81.99 |
| KRH34103 | Soybean | plastid | 56.71 | 70.45 |
| KRG92697 | Soybean | plastid | 56.71 | 70.45 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 50.0 | 63.08 |
| AT2G34160.1 | Thale cress | cytosol | 49.39 | 62.31 |
| KRH68751 | Soybean | plastid | 51.22 | 60.87 |
| KRG96999 | Soybean | nucleus | 46.34 | 58.91 |
| PGSC0003DMT400070712 | Potato | plastid | 56.1 | 56.79 |
| GSMUA_Achr4P06650_001 | Banana | cytosol | 51.22 | 56.76 |
| GSMUA_Achr4P13630_001 | Banana | cytosol | 46.34 | 56.72 |
| Solyc01g097050.2.1 | Tomato | unclear | 56.1 | 55.76 |
| CDX79500 | Canola | cytosol | 55.49 | 51.41 |
| CDY28657 | Canola | mitochondrion | 59.76 | 49.25 |
| Os12t0489300-01 | Rice | plasma membrane | 48.17 | 46.75 |
| CDY68615 | Canola | nucleus, plastid | 57.32 | 43.93 |
| TraesCS3A01G439300.1 | Wheat | nucleus | 50.0 | 43.39 |
| TraesCS3B01G473200.1 | Wheat | nucleus | 50.0 | 43.39 |
| HORVU3Hr1G095800.1 | Barley | nucleus | 49.39 | 42.86 |
| TraesCS3D01G432100.1 | Wheat | nucleus | 49.39 | 42.86 |
| EES17034 | Sorghum | nucleus | 46.34 | 40.0 |
| Zm00001d023639_P002 | Maize | cytosol | 45.73 | 36.76 |
| CDY53532 | Canola | nucleus | 48.17 | 33.47 |
Protein Annotations
| MapMan:15.3.7.2.1 | Gene3D:3.30.110.20 | EntrezGene:819620 | UniProt:A0A178VHY3 | ProteinID:AAF04892.1 | ProteinID:AEE74107.1 |
| ArrayExpress:AT3G04620 | EnsemblPlantsGene:AT3G04620 | RefSeq:AT3G04620 | TAIR:AT3G04620 | RefSeq:AT3G04620-TAIR-G | EnsemblPlants:AT3G04620.1 |
| TAIR:AT3G04620.1 | InterPro:Alba-like_dom_sf | EMBL:BT010655 | EMBL:BT010971 | InterPro:DNA/RNA-bd_Alba-like | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0048235 | InterPro:IPR036882 | RefSeq:NP_187113.1 | ProteinID:OAP05436.1 | PFAM:PF01918 |
| PIRSF:PIRSF030333 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31947 | PANTHER:PTHR31947:SF5 | UniProt:Q9SR12 | SUPFAM:SSF82704 |
| InterPro:UCP030333_Alba | UniParc:UPI00000A2DC8 | SEG:seg | : | : | : |
Description
Alba DNA/RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q9SR12]
Coordinates
chr3:-:1255398..1257017
Molecular Weight (calculated)
17667.2 Da
IEP (calculated)
5.840
GRAVY (calculated)
-0.243
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEVATPAP APIPSERNIV LAPATTTTTA TVETHKKNRI QVSNTKKPLF FYVNLAKRYI QQHNEVELSA LGMAITTVVT ISEILKNNGL ATEKKVLTST
101: VGMKDETKGK MVQKAKIEIV LGKSDKFDSL VPPVTNGKTP EEEASAETEA SVEAQEEVAA ATEV
101: VGMKDETKGK MVQKAKIEIV LGKSDKFDSL VPPVTNGKTP EEEASAETEA SVEAQEEVAA ATEV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.