CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92697	Soybean	plastid	85.61	85.61
Bra036129.1-P	Field mustard	plastid	60.61	66.12
KRH68751	Soybean	plastid	67.42	64.49
CDY57017	Canola	cytosol, nucleus, plastid	59.85	64.23
CDY00026	Canola	cytosol, nucleus, plastid	59.09	63.41
KRH09747	Soybean	cytosol, nucleus, plasma membrane	62.88	63.36
KRH23562	Soybean	nucleus	63.64	63.16
KRG96999	Soybean	nucleus	61.36	62.79
KRH44436	Soybean	nucleus	65.15	59.72
GSMUA_Achr4P13630_001	Banana	cytosol	60.61	59.7
CDX86203	Canola	cytosol	69.7	59.35
Bra010003.1-P	Field mustard	cytosol	69.7	59.35
CDY41887	Canola	cytosol	68.18	59.21
CDY50744	Canola	cytosol	68.18	59.21
Bra040393.1-P	Field mustard	cytosol	68.18	59.21
CDY40664	Canola	cytosol	71.97	59.01
CDX74179	Canola	cytosol	71.97	57.93
Bra001110.1-P	Field mustard	cytosol	71.97	57.93
AT3G04620.1	Thale cress	cytosol	70.45	56.71
CDY21118	Canola	cytosol	66.67	56.41
GSMUA_Achr4P06650_001	Banana	cytosol	62.88	56.08
PGSC0003DMT400070712	Potato	plastid	67.42	54.94
KRH47470	Soybean	nucleus	56.82	54.35
CDY30010	Canola	cytosol	65.15	54.09
Solyc01g097050.2.1	Tomato	unclear	67.42	53.94
KRH77811	Soybean	cytosol	46.21	46.21
Os12t0489300-01	Rice	plasma membrane	59.09	46.15
HORVU3Hr1G095800.1	Barley	nucleus	60.61	42.33
TraesCS3A01G439300.1	Wheat	nucleus	60.61	42.33
EES17034	Sorghum	nucleus	60.61	42.11
TraesCS3B01G473200.1	Wheat	nucleus	59.85	41.8
TraesCS3D01G432100.1	Wheat	nucleus	59.85	41.8
Zm00001d023639_P002	Maize	cytosol	59.09	38.24
CDX79500	Canola	cytosol	45.45	33.9
CDY28657	Canola	mitochondrion	49.24	32.66
CDY68615	Canola	nucleus, plastid	46.21	28.5
CDY53532	Canola	nucleus	45.45	25.42

Protein Annotations

EMBL:ACUP02006578	EnsemblPlants:KRH34103	EnsemblPlantsGene:GLYMA_10G163500	EntrezGene:100791768	Gene3D:3.30.110.20	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:Alba-like_dom_sf	InterPro:DNA/RNA-bd_Alba-like	InterPro:IPR036882	InterPro:UCP030333_Alba
PANTHER:PTHR31947	PANTHER:PTHR31947:SF5	PFAM:PF01918	PIRSF:PIRSF030333	ProteinID:KRH34103	ProteinID:KRH34103.1
SEG:seg	SUPFAM:SSF82704	UniParc:UPI000233D0A5	UniProt:I1LBN1	MapMan:15.3.7.2.1	:

Description

hypothetical protein

Coordinates

chr10:+:39742349..39744332

Molecular Weight (calculated)

14411.3 Da

IEP (calculated)

8.919

GRAVY (calculated)

-0.386

Length

132 amino acids

Sequence
(BLAST)

001: MATVAAVPAL TANDSHKKNR IQVSNTKKPL FFYVNLAKRY IQQHNEVELS ALGMAIATVV TIAEILKNNG LATEKKVLTS TVGMKDENKG RLVQKAKIEI
101: VLGKSDKFDN LMSPPAPTES EEAAADDDDK KE

Best Arabidopsis Sequence Match ( AT3G04620.1 )
(BLAST)

001: MAMEVATPAP APIPSERNIV LAPATTTTTA TVETHKKNRI QVSNTKKPLF FYVNLAKRYI QQHNEVELSA LGMAITTVVT ISEILKNNGL ATEKKVLTST
101: VGMKDETKGK MVQKAKIEIV LGKSDKFDSL VPPVTNGKTP EEEASAETEA SVEAQEEVAA ATEV

Arabidopsis Description

Alba DNA/RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q9SR12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.