Factsheet for GSMUA_Achr4P13630_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P06650_001	Banana	cytosol	70.9	64.19
KRG92697	Soybean	plastid	60.45	61.36
KRH34103	Soybean	plastid	59.7	60.61
GSMUA_Achr6P05140_001	Banana	cytosol, nucleus, plastid	56.72	58.91
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	56.72	58.91
GSMUA_Achr6P00670_001	Banana	nucleus	54.48	57.48
KRG96999	Soybean	nucleus	55.22	57.36
GSMUA_Achr7P08310_001	Banana	cytosol	55.97	56.82
CDY00026	Canola	cytosol, nucleus, plastid	51.49	56.1
GSMUA_Achr7P09990_001	Banana	cytosol	52.99	55.47
CDY57017	Canola	cytosol, nucleus, plastid	50.75	55.28
GSMUA_Achr2P17110_001	Banana	cytosol, nucleus, plasma membrane	53.73	54.96
Bra036129.1-P	Field mustard	plastid	49.25	54.55
GSMUA_Achr6P05270_001	Banana	cytosol	54.48	54.48
Os12t0489300-01	Rice	plasma membrane	68.66	54.44
KRH68751	Soybean	plastid	53.73	52.17
VIT_05s0020g04890.t01	Wine grape	cytosol	55.22	51.39
CDY40664	Canola	cytosol	58.96	49.07
CDY50744	Canola	cytosol	55.22	48.68
CDY41887	Canola	cytosol	55.22	48.68
Bra040393.1-P	Field mustard	cytosol	55.22	48.68
CDX86203	Canola	cytosol	55.97	48.39
Bra010003.1-P	Field mustard	cytosol	55.97	48.39
Bra001110.1-P	Field mustard	cytosol	58.96	48.17
CDX74179	Canola	cytosol	58.96	48.17
PGSC0003DMT400070712	Potato	plastid	57.46	47.53
EES17034	Sorghum	nucleus	67.16	47.37
HORVU3Hr1G095800.1	Barley	nucleus	66.42	47.09
TraesCS3B01G473200.1	Wheat	nucleus	66.42	47.09
TraesCS3A01G439300.1	Wheat	nucleus	66.42	47.09
Solyc01g097050.2.1	Tomato	unclear	57.46	46.67
TraesCS3D01G432100.1	Wheat	nucleus	65.67	46.56
AT3G04620.1	Thale cress	cytosol	56.72	46.34
CDY21118	Canola	cytosol	53.73	46.15
KRH77811	Soybean	cytosol	44.78	45.45
CDY30010	Canola	cytosol	52.99	44.65
Zm00001d023639_P002	Maize	cytosol	67.16	44.12
GSMUA_Achr7P10060_001	Banana	extracellular	28.36	33.33
CDY28657	Canola	mitochondrion	40.3	27.14
CDX79500	Canola	cytosol	33.58	25.42
CDY68615	Canola	nucleus, plastid	38.06	23.83
CDY53532	Canola	nucleus	36.57	20.76

Protein Annotations

EnsemblPlants:GSMUA_Achr4P13630_001	EnsemblPlants:GSMUA_Achr4T13630_001	EnsemblPlantsGene:GSMUA_Achr4G13630_001	Gene3D:3.30.110.20	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:Alba-like_dom_sf	InterPro:DNA/RNA-bd_Alba-like	InterPro:IPR036882	InterPro:UCP030333_Alba	PANTHER:PTHR31947
PANTHER:PTHR31947:SF5	PFAM:PD010497	PFAM:PF01918	PIRSF:PIRSF030333	SUPFAM:SSF82704	UniParc:UPI000294F8AB
UniProt:M0SNM8	MapMan:15.3.7.2.1	:	:	:	:

Description

Uncharacterized protein At2g34160 [Source:GMGC_GENE;Acc:GSMUA_Achr4G13630_001]

Coordinates

chr4:+:10169952..10171240

Molecular Weight (calculated)

14546.6 Da

IEP (calculated)

9.877

GRAVY (calculated)

-0.397

Length

134 amino acids

Sequence
(BLAST)

001: METVAVVENG PATGDVVGVG KIKKNRIQVS TNKKPLFFYV NLAKRYMQQY NEIELSALGM AIGTVVTVAE ILKNNGLATE KKILTSTVGT KDEAKGRLVR
101: KAKIEILMGK KNSDDHDSAD KEAAHEATEA DAKK

Best Arabidopsis Sequence Match ( AT3G04620.1 )
(BLAST)

001: MAMEVATPAP APIPSERNIV LAPATTTTTA TVETHKKNRI QVSNTKKPLF FYVNLAKRYI QQHNEVELSA LGMAITTVVT ISEILKNNGL ATEKKVLTST
101: VGMKDETKGK MVQKAKIEIV LGKSDKFDSL VPPVTNGKTP EEEASAETEA SVEAQEEVAA ATEV

Arabidopsis Description

Alba DNA/RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q9SR12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.