Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 89.15 | 89.15 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 86.05 | 87.4 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 88.37 | 86.36 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 86.05 | 85.38 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 85.27 | 85.27 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 86.82 | 84.85 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 86.05 | 84.09 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 86.05 | 84.09 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 85.27 | 83.97 |
| Os06t0602600-01 | Rice | nucleus | 85.27 | 83.33 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 81.4 | 81.4 |
| CDY17226 | Canola | nucleus | 81.4 | 80.77 |
| CDY63142 | Canola | nucleus | 81.4 | 80.77 |
| Bra005449.1-P | Field mustard | nucleus | 81.4 | 80.77 |
| KRH23562 | Soybean | nucleus | 82.95 | 80.45 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 81.4 | 80.15 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 79.07 | 79.69 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 78.29 | 77.69 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 77.52 | 76.92 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 77.52 | 76.92 |
| AT2G34160.1 | Thale cress | cytosol | 77.52 | 76.92 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 79.84 | 76.87 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 83.72 | 76.6 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 82.17 | 76.26 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 82.17 | 76.26 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 76.74 | 76.15 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 76.74 | 76.15 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 76.74 | 76.15 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 76.74 | 76.15 |
| CDX90176 | Canola | nucleus | 76.74 | 76.15 |
| Bra010843.1-P | Field mustard | nucleus | 76.74 | 76.15 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 81.4 | 75.54 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 75.97 | 75.38 |
| Os02t0202500-01 | Rice | nucleus | 40.31 | 75.36 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 80.62 | 74.82 |
| Solyc06g068050.2.1 | Tomato | nucleus | 73.64 | 74.8 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 74.42 | 73.85 |
| KRH44436 | Soybean | nucleus | 82.17 | 73.61 |
| PGSC0003DMT400073472 | Potato | cytosol | 72.09 | 73.23 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 80.62 | 70.75 |
| EES00222 | Sorghum | cytosol, nucleus, plastid | 77.52 | 68.03 |
| KRH47470 | Soybean | nucleus | 72.09 | 67.39 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 86.82 | 66.67 |
| Os01t0173100-01 | Rice | nucleus | 76.74 | 65.13 |
| TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 65.89 | 63.91 |
| TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 66.67 | 63.7 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 65.89 | 63.43 |
| EES19123 | Sorghum | nucleus | 65.89 | 63.43 |
| TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 75.19 | 63.4 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 75.19 | 62.58 |
| TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 74.42 | 61.94 |
| GSMUA_Achr4P13630_001 | Banana | cytosol | 58.91 | 56.72 |
| GSMUA_Achr4P06650_001 | Banana | cytosol | 61.24 | 53.38 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 39.53 | 51.0 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 43.41 | 49.12 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 62.79 | 49.09 |
| Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 67.44 | 43.72 |
| Zm00001d009798_P001 | Maize | cytosol | 58.91 | 41.3 |
| Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 55.04 | 29.46 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P05140_001 | EnsemblPlants:GSMUA_Achr6T05140_001 | EnsemblPlantsGene:GSMUA_Achr6G05140_001 | Gene3D:3.30.110.20 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:Alba-like_dom_sf | InterPro:DNA/RNA-bd_Alba-like | InterPro:IPR036882 | InterPro:UCP030333_Alba | PANTHER:PTHR31947 |
| PANTHER:PTHR31947:SF11 | PFAM:PF01918 | PIRSF:PIRSF030333 | SEG:seg | SUPFAM:SSF82704 | UniParc:UPI000295F797 |
| UniProt:M0T4B2 | MapMan:15.3.7.2.1 | : | : | : | : |
Description
Uncharacterized protein At2g34160 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05140_001]
Coordinates
chr6:+:3481246..3484173
Molecular Weight (calculated)
14277.1 Da
IEP (calculated)
5.003
GRAVY (calculated)
-0.395
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEITDGVNN LSVTADSYKK NRIQVSNTKK PLFFYVNLAK RYMQQHNEVE LSALGMAIAT VVTIAEILKN NGLAVEKKIM TSTVDVNDES RGRPLQKAKI
101: EILLGKTEKF DELMAAAAEK EAGDGEEQS
101: EILLGKTEKF DELMAAAAEK EAGDGEEQS
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.