Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 100.0 | 100.0 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 98.56 | 98.56 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 88.49 | 87.23 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 86.33 | 86.33 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 78.42 | 83.85 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 77.7 | 83.72 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 78.42 | 82.58 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 76.26 | 82.17 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 74.1 | 81.1 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 76.26 | 80.92 |
| Os02t0202500-01 | Rice | nucleus | 39.57 | 79.71 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 73.38 | 79.07 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 74.82 | 78.79 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 73.38 | 77.86 |
| KRH23562 | Soybean | nucleus | 74.1 | 77.44 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 71.94 | 76.92 |
| CDY63142 | Canola | nucleus | 70.5 | 75.38 |
| CDY17226 | Canola | nucleus | 70.5 | 75.38 |
| Bra005449.1-P | Field mustard | nucleus | 70.5 | 75.38 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 69.78 | 74.62 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 69.78 | 74.62 |
| AT2G34160.1 | Thale cress | cytosol | 69.06 | 73.85 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 69.06 | 73.85 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 69.06 | 73.85 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 69.06 | 73.85 |
| Bra010843.1-P | Field mustard | nucleus | 68.35 | 73.08 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 68.35 | 73.08 |
| CDX90176 | Canola | nucleus | 68.35 | 73.08 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 67.63 | 72.31 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 66.91 | 71.54 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 65.47 | 71.09 |
| Solyc06g068050.2.1 | Tomato | nucleus | 64.75 | 70.87 |
| KRH44436 | Soybean | nucleus | 72.66 | 70.14 |
| PGSC0003DMT400073472 | Potato | cytosol | 64.03 | 70.08 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 71.94 | 68.03 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 65.47 | 67.91 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 63.31 | 65.67 |
| KRH47470 | Soybean | nucleus | 63.31 | 63.77 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 64.03 | 57.42 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 35.97 | 43.86 |
| TraesCS3D01G432100.1 | Wheat | nucleus | 50.36 | 37.04 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G168100.1 | EnsemblPlantsGene:TraesCS6D01G168100 | Gene3D:3.30.110.20 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:Alba-like_dom_sf | InterPro:DNA/RNA-bd_Alba-like | InterPro:IPR036882 | InterPro:UCP030333_Alba | PANTHER:PTHR31947 | PANTHER:PTHR31947:SF11 |
| PFAM:PF01918 | PIRSF:PIRSF030333 | SEG:seg | SUPFAM:SSF82704 | MapMan:15.3.7.2.1 | : |
Description
No Description!
Coordinates
chr6D:+:152263802..152266287
Molecular Weight (calculated)
15189.2 Da
IEP (calculated)
4.894
GRAVY (calculated)
-0.291
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVTEAVNN LTIAEGAAAT AGAEGHKKNR IQVSNTKKPL FFYVNLAKRY MQLHEEVELS ALGMAIATVV TVAEILKNNG LAVEKKIMTS TVDVKDDTRN
101: RPIQKAKIEI LIGKTEKFDE LMAAAAEERE AAGAEEEQS
101: RPIQKAKIEI LIGKTEKFDE LMAAAAEERE AAGAEEEQS
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.