Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 92.31 | 93.02 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 84.62 | 86.61 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 85.38 | 86.05 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 85.38 | 84.73 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 85.38 | 84.09 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 83.08 | 83.72 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 84.62 | 83.33 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 82.31 | 82.95 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 83.85 | 82.58 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 83.85 | 82.58 |
| Os06t0602600-01 | Rice | nucleus | 83.85 | 82.58 |
| CDY17226 | Canola | nucleus | 80.77 | 80.77 |
| CDY63142 | Canola | nucleus | 80.77 | 80.77 |
| Bra005449.1-P | Field mustard | nucleus | 80.77 | 80.77 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 80.77 | 80.77 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 78.46 | 78.46 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 78.46 | 78.46 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 83.85 | 78.42 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 83.85 | 78.42 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 83.85 | 78.42 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 84.62 | 78.01 |
| AT2G34160.1 | Thale cress | cytosol | 77.69 | 77.69 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 77.69 | 77.69 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 77.69 | 77.69 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 87.69 | 77.55 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 82.31 | 76.98 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 76.92 | 76.92 |
| Bra010843.1-P | Field mustard | nucleus | 76.15 | 76.15 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 76.15 | 76.15 |
| CDX90176 | Canola | nucleus | 76.15 | 76.15 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 76.15 | 76.15 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 76.15 | 76.15 |
| Os02t0202500-01 | Rice | nucleus | 40.0 | 75.36 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 73.85 | 75.0 |
| Solyc06g068050.2.1 | Tomato | nucleus | 72.31 | 74.02 |
| PGSC0003DMT400073472 | Potato | cytosol | 71.54 | 73.23 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 72.31 | 70.15 |
| EES00222 | Sorghum | cytosol, nucleus, plastid | 75.38 | 66.67 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 84.62 | 65.48 |
| TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 66.92 | 65.41 |
| TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 67.69 | 65.19 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 66.92 | 64.93 |
| Os01t0173100-01 | Rice | nucleus | 74.62 | 63.82 |
| EES19123 | Sorghum | nucleus | 64.62 | 62.69 |
| TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 71.54 | 60.78 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 70.77 | 59.35 |
| TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 70.0 | 58.71 |
| VIT_05s0020g04890.t01 | Wine grape | cytosol | 57.69 | 52.08 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 63.85 | 50.3 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 38.46 | 50.0 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 43.08 | 49.12 |
| Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 65.38 | 42.71 |
| Zm00001d009798_P001 | Maize | cytosol | 57.69 | 40.76 |
| Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 53.85 | 29.05 |
Protein Annotations
| EntrezGene:100268144 | wikigene:100268144 | MapMan:15.3.7.2.1 | Gene3D:3.30.110.20 | InterPro:Alba-like_dom_sf | ProteinID:CBI28181 |
| ProteinID:CBI28181.3 | UniProt:D7TBZ6 | InterPro:DNA/RNA-bd_Alba-like | EMBL:FN595756 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR036882 | EntrezGene:LOC100268144 | wikigene:LOC100268144 | PFAM:PF01918 | PIRSF:PIRSF030333 |
| PANTHER:PTHR31947 | PANTHER:PTHR31947:SF11 | SUPFAM:SSF82704 | TIGR:TC69433 | InterPro:UCP030333_Alba | UniParc:UPI00015C8C5F |
| ArrayExpress:VIT_11s0016g05100 | EnsemblPlantsGene:VIT_11s0016g05100 | EnsemblPlants:VIT_11s0016g05100.t01 | unigene:Vvi.7355 | RefSeq:XP_002285115 | RefSeq:XP_002285115.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:4382054..4385678
Molecular Weight (calculated)
14555.5 Da
IEP (calculated)
5.029
GRAVY (calculated)
-0.448
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEITEGVNS MNIADSHKKN RIQVSNTKKP LFFYVNLAKR YMQQHNEVEL SALGMAIATV VTIAEILKNN GLAVEKKIMT STVDMKDESR GRPIQKAKIE
101: ILLGKTENFD ELMAAAAEER EAGDVEEQQS
101: ILLGKTENFD ELMAAAAEER EAGDVEEQQS
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.