Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 87.4 | 86.05 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 88.19 | 84.85 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 86.61 | 84.62 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 85.83 | 84.5 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 86.61 | 83.97 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 85.04 | 83.72 |
| KRH23562 | Soybean | nucleus | 85.83 | 81.95 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 82.68 | 79.55 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 81.89 | 79.39 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 80.31 | 79.07 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 81.89 | 78.79 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 81.89 | 78.79 |
| Os06t0602600-01 | Rice | nucleus | 81.89 | 78.79 |
| CDY17226 | Canola | nucleus | 77.95 | 76.15 |
| CDY63142 | Canola | nucleus | 77.95 | 76.15 |
| Bra005449.1-P | Field mustard | nucleus | 77.95 | 76.15 |
| Solyc06g068050.2.1 | Tomato | nucleus | 74.8 | 74.8 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 78.74 | 74.63 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 76.38 | 74.62 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 74.8 | 74.22 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 81.1 | 74.1 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 81.1 | 74.1 |
| PGSC0003DMT400073472 | Potato | cytosol | 74.02 | 74.02 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 81.89 | 73.76 |
| AT2G34160.1 | Thale cress | cytosol | 74.8 | 73.08 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 79.53 | 72.66 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 79.53 | 72.66 |
| Bra010843.1-P | Field mustard | nucleus | 74.02 | 72.31 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 74.02 | 72.31 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 74.02 | 72.31 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 74.02 | 72.31 |
| CDX90176 | Canola | nucleus | 74.02 | 72.31 |
| KRH44436 | Soybean | nucleus | 81.89 | 72.22 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 73.23 | 71.54 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 73.23 | 71.54 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 73.23 | 71.54 |
| Os02t0202500-01 | Rice | nucleus | 38.58 | 71.01 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 72.44 | 70.77 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 81.1 | 70.07 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 70.87 | 69.23 |
| KRH47470 | Soybean | nucleus | 71.65 | 65.94 |
| EES00222 | Sorghum | cytosol, nucleus, plastid | 74.02 | 63.95 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 66.93 | 63.43 |
| TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 66.14 | 63.16 |
| TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 66.93 | 62.96 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 82.68 | 62.5 |
| Os01t0173100-01 | Rice | nucleus | 72.44 | 60.53 |
| EES19123 | Sorghum | nucleus | 63.78 | 60.45 |
| TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 71.65 | 59.48 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 71.65 | 58.71 |
| TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 70.08 | 57.42 |
| GSMUA_Achr4P13630_001 | Banana | cytosol | 57.48 | 54.48 |
| GSMUA_Achr4P06650_001 | Banana | cytosol | 61.42 | 52.7 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 39.37 | 50.0 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 62.2 | 47.88 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 41.73 | 46.49 |
| Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 65.35 | 41.71 |
| Zm00001d009798_P001 | Maize | cytosol | 57.48 | 39.67 |
| Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 51.97 | 27.39 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P00670_001 | EnsemblPlants:GSMUA_Achr6T00670_001 | EnsemblPlantsGene:GSMUA_Achr6G00670_001 | Gene3D:3.30.110.20 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:Alba-like_dom_sf | InterPro:DNA/RNA-bd_Alba-like | InterPro:IPR036882 | InterPro:UCP030333_Alba | PANTHER:PTHR31947 |
| PANTHER:PTHR31947:SF11 | PFAM:PF01918 | PIRSF:PIRSF030333 | SUPFAM:SSF82704 | UniParc:UPI000296F3B9 | UniProt:M0T315 |
| MapMan:15.3.7.2.1 | : | : | : | : | : |
Description
Uncharacterized protein At2g34160 [Source:GMGC_GENE;Acc:GSMUA_Achr6G00670_001]
Coordinates
chr6:-:451207..455172
Molecular Weight (calculated)
14105.9 Da
IEP (calculated)
5.245
GRAVY (calculated)
-0.357
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIAEGVNN LHIAAPDSYK NNRIQVSNTK KPLFFYVNLA KRYMQQHNEV ELSALGMAIA TVVTIAEILK NNGLAVEKKI TTSTVDVKDE SRGWPIQKAK
101: IEILLGKTEN FDELMAAAAE GDNKEQS
101: IEILLGKTEN FDELMAAAAE GDNKEQS
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.