Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63142 | Canola | nucleus | 100.0 | 100.0 |
| CDY17226 | Canola | nucleus | 99.23 | 99.23 |
| AT2G34160.1 | Thale cress | cytosol | 91.54 | 91.54 |
| Bra010843.1-P | Field mustard | nucleus | 90.0 | 90.0 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 88.46 | 88.46 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 86.92 | 86.92 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 80.77 | 81.4 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 80.77 | 80.77 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 79.23 | 79.84 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 77.69 | 78.29 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 76.15 | 77.95 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 76.15 | 76.74 |
| KRH23562 | Soybean | nucleus | 78.46 | 76.69 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 76.92 | 76.34 |
| Os06t0602600-01 | Rice | nucleus | 76.92 | 75.76 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 76.15 | 75.0 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 75.38 | 74.24 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 75.38 | 74.24 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 74.62 | 74.05 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 74.62 | 73.48 |
| Os02t0202500-01 | Rice | nucleus | 38.46 | 72.46 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 76.92 | 71.94 |
| PGSC0003DMT400073472 | Potato | cytosol | 70.0 | 71.65 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 77.69 | 71.63 |
| Solyc06g068050.2.1 | Tomato | nucleus | 69.23 | 70.87 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 75.38 | 70.5 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 75.38 | 70.5 |
| Solyc06g065980.2.1 | Tomato | nucleus | 69.23 | 70.31 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 74.62 | 69.78 |
| PGSC0003DMT400052712 | Potato | cytosol | 68.46 | 69.53 |
| PGSC0003DMT400052773 | Potato | cytosol | 68.46 | 69.53 |
| Solyc06g066100.2.1 | Tomato | nucleus | 68.46 | 69.53 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 67.69 | 68.75 |
| KRH44436 | Soybean | nucleus | 76.15 | 68.75 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 77.69 | 68.71 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 69.23 | 67.16 |
| EES00222 | Sorghum | cytosol, nucleus, plastid | 73.08 | 64.63 |
| Os01t0173100-01 | Rice | nucleus | 75.38 | 64.47 |
| KRH47470 | Soybean | nucleus | 66.15 | 62.32 |
| TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 62.31 | 60.9 |
| TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 63.08 | 60.74 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 62.31 | 60.45 |
| TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 69.23 | 58.82 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 75.38 | 58.33 |
| TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 69.23 | 58.06 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 69.23 | 58.06 |
| EES19123 | Sorghum | nucleus | 59.23 | 57.46 |
| Bra036129.1-P | Field mustard | plastid | 51.54 | 55.37 |
| Bra040393.1-P | Field mustard | cytosol | 61.54 | 52.63 |
| Bra001110.1-P | Field mustard | cytosol | 65.38 | 51.83 |
| Bra010003.1-P | Field mustard | cytosol | 58.46 | 49.03 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 37.69 | 49.0 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 59.23 | 46.67 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 37.69 | 42.98 |
| Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 63.08 | 41.21 |
| Zm00001d009798_P001 | Maize | cytosol | 54.62 | 38.59 |
| Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 51.54 | 27.8 |
Protein Annotations
| MapMan:15.3.7.2.1 | Gene3D:3.30.110.20 | InterPro:Alba-like_dom_sf | EnsemblPlantsGene:Bra005449 | EnsemblPlants:Bra005449.1 | EnsemblPlants:Bra005449.1-P |
| ncoils:Coil | InterPro:DNA/RNA-bd_Alba-like | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR036882 | UniProt:M4CML1 |
| PFAM:PF01918 | PIRSF:PIRSF030333 | PANTHER:PTHR31947 | PANTHER:PTHR31947:SF11 | SUPFAM:SSF82704 | InterPro:UCP030333_Alba |
| UniParc:UPI0002548107 | SEG:seg | : | : | : | : |
Description
AT2G34160 (E=5e-055) | nucleic acid binding
Coordinates
chrA05:-:5543718..5544554
Molecular Weight (calculated)
14445.4 Da
IEP (calculated)
5.967
GRAVY (calculated)
-0.427
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEITDGVNN MNLAVDSQKK NRIQVSNTKK PLFFYVNLAK RYMQEHNDVE LSALGMAIAT VVTIAEILKN NGFAVEKKIM TSTVDIKDGS RGRPVQKPKI
101: EITLGKSEKF DELMAAANEE KEAAEAQVQS
101: EITLGKSEKF DELMAAANEE KEAAEAQVQS
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.