Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
19621931
plasma membrane: 27800704 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0602600-01 | Rice | nucleus | 89.86 | 46.97 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 82.61 | 40.43 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 75.36 | 40.31 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 75.36 | 40.31 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 75.36 | 40.0 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 75.36 | 40.0 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 75.36 | 40.0 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 75.36 | 40.0 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 75.36 | 40.0 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 79.71 | 39.57 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 79.71 | 39.57 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 75.36 | 39.39 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 73.91 | 39.23 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 73.91 | 39.23 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 73.91 | 39.23 |
| KRH23562 | Soybean | nucleus | 75.36 | 39.1 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 73.91 | 38.93 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 73.91 | 38.93 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 78.26 | 38.85 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 71.01 | 38.58 |
| CDY63142 | Canola | nucleus | 72.46 | 38.46 |
| CDY17226 | Canola | nucleus | 72.46 | 38.46 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 72.46 | 38.46 |
| Bra005449.1-P | Field mustard | nucleus | 72.46 | 38.46 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 71.01 | 37.98 |
| AT2G34160.1 | Thale cress | cytosol | 71.01 | 37.69 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 75.36 | 37.41 |
| PGSC0003DMT400073472 | Potato | cytosol | 66.67 | 36.22 |
| Solyc06g068050.2.1 | Tomato | nucleus | 65.22 | 35.43 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 66.67 | 35.38 |
| CDX90176 | Canola | nucleus | 66.67 | 35.38 |
| Bra010843.1-P | Field mustard | nucleus | 66.67 | 35.38 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 68.12 | 35.07 |
| KRH47470 | Soybean | nucleus | 69.57 | 34.78 |
| Os01t0173100-01 | Rice | nucleus | 73.91 | 33.55 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 60.87 | 32.81 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 69.57 | 32.65 |
| KRH44436 | Soybean | nucleus | 68.12 | 32.64 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 53.62 | 32.46 |
| Os12t0489300-01 | Rice | plasma membrane | 49.28 | 20.12 |
Protein Annotations
| EnsemblPlants:Os02t0202500-01 | EnsemblPlantsGene:Os02g0202500 | Gene3D:3.30.110.20 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:Alba-like_dom_sf | InterPro:IPR036882 | ncoils:Coil | PANTHER:PTHR31947 | PANTHER:PTHR31947:SF12 | ProteinID:BAF08145.1 |
| ProteinID:BAS77529.1 | SEG:seg | SUPFAM:SSF82704 | UniParc:UPI0000DF05D3 | UniProt:Q0E2Z3 | MapMan:15.3.7.2.1 |
Description
Similar to nucleic acid binding. (Os02t0202500-01)
Coordinates
chr2:-:5740443..5741030
Molecular Weight (calculated)
7550.9 Da
IEP (calculated)
4.401
GRAVY (calculated)
-0.613
Length
69 amino acids
Sequence
(BLAST)
(BLAST)
1: EILKNNGLAV EKKIMTSTVD VKDDSRSRPM QKAKIEIVLG KTDKFDELMA AAAEEREAAA AEAEAEEQS
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.