Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- mitochondrion 2
- plastid 1
- cytosol 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 76.87 | 79.84 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 74.63 | 78.74 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 74.63 | 75.76 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 72.39 | 75.19 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 70.9 | 73.64 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 71.64 | 73.28 |
| Os06t0602600-01 | Rice | nucleus | 71.64 | 72.73 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 71.64 | 72.73 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 70.15 | 72.31 |
| KRH23562 | Soybean | nucleus | 71.64 | 72.18 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 70.9 | 71.97 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 70.9 | 71.97 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 68.66 | 71.32 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 67.91 | 71.09 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 69.4 | 70.99 |
| Bra005449.1-P | Field mustard | nucleus | 67.16 | 69.23 |
| CDY17226 | Canola | nucleus | 67.16 | 69.23 |
| CDY63142 | Canola | nucleus | 67.16 | 69.23 |
| Os02t0202500-01 | Rice | nucleus | 35.07 | 68.12 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 65.67 | 67.69 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 65.67 | 67.69 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 65.67 | 67.69 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 65.67 | 67.69 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 65.67 | 67.69 |
| Solyc06g068050.2.1 | Tomato | nucleus | 63.43 | 66.93 |
| PGSC0003DMT400073472 | Potato | cytosol | 63.43 | 66.93 |
| AT2G34160.1 | Thale cress | cytosol | 64.93 | 66.92 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 64.18 | 66.15 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 64.18 | 66.15 |
| CDX90176 | Canola | nucleus | 64.18 | 66.15 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 64.18 | 66.15 |
| Bra010843.1-P | Field mustard | nucleus | 64.18 | 66.15 |
| KRH44436 | Soybean | nucleus | 70.9 | 65.97 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 69.4 | 65.96 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 67.91 | 65.47 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 67.91 | 65.47 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 67.16 | 64.75 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 67.16 | 64.75 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 62.69 | 64.62 |
| EES00222 | Sorghum | cytosol, nucleus, plastid | 69.4 | 63.27 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 62.69 | 62.69 |
| TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 61.94 | 62.41 |
| KRH47470 | Soybean | nucleus | 63.43 | 61.59 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 67.16 | 61.22 |
| TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 61.19 | 60.74 |
| Os01t0173100-01 | Rice | nucleus | 67.16 | 59.21 |
| TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 67.16 | 58.82 |
| EES19123 | Sorghum | nucleus | 58.21 | 58.21 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 67.16 | 58.06 |
| TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 67.16 | 58.06 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 71.64 | 57.14 |
| GSMUA_Achr4P13630_001 | Banana | cytosol | 54.48 | 54.48 |
| GSMUA_Achr4P06650_001 | Banana | cytosol | 55.97 | 50.68 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 58.96 | 47.88 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 38.06 | 44.74 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 32.09 | 43.0 |
| Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 61.94 | 41.71 |
| Zm00001d009798_P001 | Maize | cytosol | 55.22 | 40.22 |
| Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 48.51 | 26.97 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P05270_001 | EnsemblPlants:GSMUA_Achr6T05270_001 | EnsemblPlantsGene:GSMUA_Achr6G05270_001 | Gene3D:3.30.110.20 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:Alba-like_dom_sf | InterPro:DNA/RNA-bd_Alba-like | InterPro:IPR036882 | InterPro:UCP030333_Alba | PANTHER:PTHR31947 |
| PANTHER:PTHR31947:SF11 | PFAM:PF01918 | PIRSF:PIRSF030333 | SEG:seg | SUPFAM:SSF82704 | UniParc:UPI00029499B5 |
| UniProt:M0T4C5 | MapMan:15.3.7.2.1 | : | : | : | : |
Description
Uncharacterized protein At2g34160 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05270_001]
Coordinates
chr6:-:3557068..3559497
Molecular Weight (calculated)
14684.7 Da
IEP (calculated)
4.807
GRAVY (calculated)
-0.177
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIADGVDNL SVAADSQKKN RIDVSNTKKP LFFYVNLAKR YMQQHSEVEL SALGMAIATV VTMAEILKNN GLAVEKKITT STFDVKDEST GWLMQKAKIE
101: ILLGKMEKFD ELMAAAAAAV AVVEKDGRDG EEQS
101: ILLGKMEKFD ELMAAAAAAV AVVEKDGRDG EEQS
001: MEEITEGVNN MNLAVDTQKK NRIQVSNTKK PLFFYVNLAK RYMQQYTDVE LSALGMAIAT VVTVAEILKN NGFAVEKKIM TSTVDIKDDS RGRPVQKAKI
101: EITLAKSEKF DELMAAANEE KEAAEAQEQN
101: EITLAKSEKF DELMAAANEE KEAAEAQEQN
Arabidopsis Description
Alba DNA/RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q9LP53]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.