Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50785 | Canola | cytosol, nucleus, plastid | 99.23 | 99.23 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 96.15 | 96.15 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 94.62 | 94.62 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 93.85 | 93.85 |
| Bra010843.1-P | Field mustard | nucleus | 92.31 | 92.31 |
| Bra005449.1-P | Field mustard | nucleus | 86.92 | 86.92 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 78.46 | 79.07 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 76.15 | 76.15 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 75.38 | 75.97 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 75.38 | 75.97 |
| KRH23562 | Soybean | nucleus | 77.69 | 75.94 |
| Os06t0602600-01 | Rice | nucleus | 76.92 | 75.76 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 76.15 | 75.57 |
| Os02t0202500-01 | Rice | nucleus | 39.23 | 73.91 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 73.08 | 73.64 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 73.85 | 72.73 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 73.08 | 72.52 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 70.77 | 72.44 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 73.08 | 71.97 |
| PGSC0003DMT400052773 | Potato | cytosol | 70.77 | 71.88 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 72.31 | 71.21 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 72.31 | 71.21 |
| PGSC0003DMT400052712 | Potato | cytosol | 70.0 | 71.09 |
| Solyc06g066100.2.1 | Tomato | nucleus | 70.0 | 71.09 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 76.92 | 70.92 |
| Solyc06g065980.2.1 | Tomato | nucleus | 69.23 | 70.31 |
| PGSC0003DMT400073472 | Potato | cytosol | 67.69 | 69.29 |
| Solyc06g068050.2.1 | Tomato | nucleus | 66.92 | 68.5 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 73.08 | 68.35 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 73.08 | 68.35 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 73.08 | 68.35 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 73.08 | 68.35 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 66.92 | 67.97 |
| KRH44436 | Soybean | nucleus | 74.62 | 67.36 |
| EES00222 | Sorghum | cytosol, nucleus, plastid | 73.85 | 65.31 |
| Os01t0173100-01 | Rice | nucleus | 75.38 | 64.47 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 66.15 | 64.18 |
| TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 64.62 | 63.16 |
| TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 65.38 | 62.96 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 64.62 | 62.69 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 70.77 | 62.59 |
| KRH47470 | Soybean | nucleus | 64.62 | 60.87 |
| TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 68.46 | 58.17 |
| TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 69.23 | 58.06 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 69.23 | 58.06 |
| EES19123 | Sorghum | nucleus | 58.46 | 56.72 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 73.08 | 56.55 |
| Bra036129.1-P | Field mustard | plastid | 49.23 | 52.89 |
| Bra040393.1-P | Field mustard | cytosol | 59.23 | 50.66 |
| Bra001110.1-P | Field mustard | cytosol | 63.08 | 50.0 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 37.69 | 49.0 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 61.54 | 48.48 |
| Bra010003.1-P | Field mustard | cytosol | 55.38 | 46.45 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 37.69 | 42.98 |
| Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 63.85 | 41.71 |
| Zm00001d009798_P001 | Maize | cytosol | 53.08 | 37.5 |
| Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 51.54 | 27.8 |
Protein Annotations
| EnsemblPlants:Bra032296.1 | EnsemblPlants:Bra032296.1-P | EnsemblPlantsGene:Bra032296 | Gene3D:3.30.110.20 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:Alba-like_dom_sf | InterPro:DNA/RNA-bd_Alba-like | InterPro:IPR036882 | InterPro:UCP030333_Alba | ncoils:Coil |
| PANTHER:PTHR31947 | PANTHER:PTHR31947:SF11 | PFAM:PF01918 | PIRSF:PIRSF030333 | SEG:seg | SUPFAM:SSF82704 |
| UniParc:UPI00025426AE | UniProt:M4EU14 | MapMan:15.3.7.2.1 | : | : | : |
Description
AT1G29250 (E=5e-053) | nucleic acid binding
Coordinates
chrA09:-:22752607..22753651
Molecular Weight (calculated)
14461.5 Da
IEP (calculated)
6.928
GRAVY (calculated)
-0.388
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGITEGVNN MSLGVDTQKK NRIKVSNTKK PLFFYVNLAK RYMQQYADVE LSALGMAIAT VVTVAEILKN NGFAVEKKIM TMTVDIKDDS RGRPVQKAKI
101: EITLAKSDKF DELMAAANEE KEAAEAQEQN
101: EITLAKSDKF DELMAAANEE KEAAEAQEQN
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.