Factsheet for GSMUA_Achr7P10060_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 4
plastid 2
peroxisome 1
cytosol 2
plasma membrane 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus, peroxisome, plasma membrane, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0202500-01	Rice	nucleus	32.46	53.62
GSMUA_Achr7P09990_001	Banana	cytosol	50.0	44.53
GSMUA_Achr6P05140_001	Banana	cytosol, nucleus, plastid	49.12	43.41
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	49.12	43.41
VIT_11s0016g05100.t01	Wine grape	nucleus	49.12	43.08
VIT_09s0002g06460.t01	Wine grape	cytosol, nucleus, plastid	47.37	41.86
GSMUA_Achr6P00670_001	Banana	nucleus	46.49	41.73
KRH23562	Soybean	nucleus	47.37	40.6
GSMUA_Achr2P17110_001	Banana	cytosol, nucleus, plasma membrane	46.49	40.46
TraesCS7A01G374500.1	Wheat	nucleus	46.49	40.15
TraesCS7D01G348900.1	Wheat	cytosol, nucleus, plastid	46.49	40.15
KRH09747	Soybean	cytosol, nucleus, plasma membrane	45.61	39.69
TraesCS7B01G252900.1	Wheat	cytosol	45.61	39.39
Os06t0602600-01	Rice	nucleus	45.61	39.39
GSMUA_Achr7P08310_001	Banana	cytosol	44.74	38.64
CDY15643	Canola	cytosol, endoplasmic reticulum, nucleus	43.86	38.46
CDX94654	Canola	cytosol, endoplasmic reticulum, nucleus	43.86	38.46
GSMUA_Achr6P05270_001	Banana	cytosol	44.74	38.06
EER88613	Sorghum	cytosol, nucleus, plastid	42.98	37.98
Solyc06g068050.2.1	Tomato	nucleus	42.11	37.8
PGSC0003DMT400073472	Potato	cytosol	42.11	37.8
AT1G29250.1	Thale cress	cytosol, nucleus, plastid	42.98	37.69
Bra005449.1-P	Field mustard	nucleus	42.98	37.69
Bra032296.1-P	Field mustard	cytosol, nucleus, plastid	42.98	37.69
Bra010843.1-P	Field mustard	nucleus	42.98	37.69
Bra030127.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	42.98	37.69
CDY63142	Canola	nucleus	42.98	37.69
CDY50785	Canola	cytosol, nucleus, plastid	42.98	37.69
CDY17226	Canola	nucleus	42.98	37.69
CDY15644	Canola	cytosol, endoplasmic reticulum, nucleus	42.98	37.69
CDX99800	Canola	cytosol, nucleus, plastid	42.98	37.69
CDX90176	Canola	nucleus	42.98	37.69
CDY43326	Canola	cytosol, nucleus, plastid	42.11	36.92
EES06481	Sorghum	cytosol, nucleus, plastid	45.61	36.88
Zm00001d053625_P001	Maize	extracellular, plasma membrane	44.74	36.69
AT2G34160.1	Thale cress	cytosol	41.23	36.15
TraesCS6D01G168100.1	Wheat	cytosol, nucleus, plastid	43.86	35.97
TraesCS6B01G209900.1	Wheat	cytosol, nucleus, plastid	43.86	35.97
KRH47470	Soybean	nucleus	42.98	35.51
VIT_04s0023g02330.t01	Wine grape	cytosol	45.61	35.37
TraesCS6A01G175200.1	Wheat	cytosol, nucleus, plastid	42.98	35.25
KRH44436	Soybean	nucleus	43.86	34.72
EES19123	Sorghum	nucleus	40.35	34.33
EES00222	Sorghum	cytosol, nucleus, plastid	41.23	31.97
Os01t0173100-01	Rice	nucleus	42.11	31.58
HORVU7Hr1G084100.1	Barley	mitochondrion	46.49	31.55
TraesCS1B01G135500.1	Wheat	cytosol, nucleus, plastid	35.96	30.83
TraesCS3B01G148300.1	Wheat	cytosol, nucleus, plastid	41.23	30.72
TraesCS1D01G117000.1	Wheat	cytosol	35.96	30.6
TraesCS1A01G115600.1	Wheat	cytosol, nucleus, plastid	35.96	30.37
TraesCS3D01G130100.1	Wheat	cytosol, nucleus, plastid	41.23	30.32
TraesCS3A01G129200.1	Wheat	cytosol, nucleus, plastid	39.47	29.03
GSMUA_Achr4P13630_001	Banana	cytosol	33.33	28.36
GSMUA_Achr4P06650_001	Banana	cytosol	35.96	27.7
HORVU1Hr1G025500.1	Barley	cytosol, nucleus, plastid	36.84	25.45
Zm00001d039663_P005	Maize	nucleus, peroxisome, plastid	40.35	23.12
Zm00001d009798_P001	Maize	cytosol	36.84	22.83
Zm00001d008731_P001	Maize	nucleus, plasma membrane, vacuole	24.56	11.62
Zm00001d046401_P001	Maize	cytosol, nucleus, plasma membrane	8.77	10.0

Protein Annotations

EnsemblPlants:GSMUA_Achr7P10060_001	EnsemblPlants:GSMUA_Achr7T10060_001	EnsemblPlantsGene:GSMUA_Achr7G10060_001	Gene3D:3.30.110.20	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:Alba-like_dom_sf	InterPro:IPR036882	PANTHER:PTHR31947	PANTHER:PTHR31947:SF11	SUPFAM:SSF82704
UniParc:UPI0002965134	UniProt:M0TG94	MapMan:15.3.7.2.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G10060_001]

Coordinates

chr7:+:8134707..8135302

Molecular Weight (calculated)

12875.6 Da

IEP (calculated)

6.497

GRAVY (calculated)

-0.061

Length

114 amino acids

Sequence
(BLAST)

001: MQHYNYGICC FSTSFSRVAP TELCASIFIF HGCLNNDYFD LTAIATVVTI AEILKNNGLA VEKKIMNRWL VWRMRPGGRL LQKARIEILL GKTENFDELM
101: AAAAQRGDGD DEQN

Best Arabidopsis Sequence Match ( AT2G34160.1 )
(BLAST)

001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN

Arabidopsis Description

Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.