CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030127.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	100.0	100.0
CDY15643	Canola	cytosol, endoplasmic reticulum, nucleus	99.23	99.23
CDX94654	Canola	cytosol, endoplasmic reticulum, nucleus	98.46	98.46
CDY50785	Canola	cytosol, nucleus, plastid	94.62	94.62
AT1G29250.1	Thale cress	cytosol, nucleus, plastid	93.85	93.85
CDX99800	Canola	cytosol, nucleus, plastid	93.85	93.85
CDX90176	Canola	nucleus	90.77	90.77
CDY43326	Canola	cytosol, nucleus, plastid	89.23	89.23
CDY63142	Canola	nucleus	88.46	88.46
CDY17226	Canola	nucleus	87.69	87.69
EER88613	Sorghum	cytosol, nucleus, plastid	78.46	79.07
VIT_11s0016g05100.t01	Wine grape	nucleus	78.46	78.46
GSMUA_Achr6P05140_001	Banana	cytosol, nucleus, plastid	76.92	77.52
KRH23562	Soybean	nucleus	79.23	77.44
VIT_09s0002g06460.t01	Wine grape	cytosol, nucleus, plastid	76.15	76.74
Os06t0602600-01	Rice	nucleus	77.69	76.52
KRH09747	Soybean	cytosol, nucleus, plasma membrane	76.92	76.34
Os02t0202500-01	Rice	nucleus	40.0	75.36
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	73.85	74.42
GSMUA_Achr6P00670_001	Banana	nucleus	72.31	74.02
TraesCS7A01G374500.1	Wheat	nucleus	74.62	73.48
TraesCS7D01G348900.1	Wheat	cytosol, nucleus, plastid	73.85	72.73
GSMUA_Achr7P08310_001	Banana	cytosol	73.85	72.73
GSMUA_Achr2P17110_001	Banana	cytosol, nucleus, plasma membrane	73.08	72.52
TraesCS7B01G252900.1	Wheat	cytosol	73.08	71.97
PGSC0003DMT400052773	Potato	cytosol	70.77	71.88
Solyc06g066100.2.1	Tomato	nucleus	70.0	71.09
PGSC0003DMT400052712	Potato	cytosol	70.0	71.09
EES06481	Sorghum	cytosol, nucleus, plastid	76.92	70.92
Solyc06g065980.2.1	Tomato	nucleus	69.23	70.31
PGSC0003DMT400073472	Potato	cytosol	68.46	70.08
Zm00001d053625_P001	Maize	extracellular, plasma membrane	74.62	69.78
TraesCS6D01G168100.1	Wheat	cytosol, nucleus, plastid	74.62	69.78
TraesCS6B01G209900.1	Wheat	cytosol, nucleus, plastid	74.62	69.78
TraesCS6A01G175200.1	Wheat	cytosol, nucleus, plastid	74.62	69.78
Solyc06g068050.2.1	Tomato	nucleus	67.69	69.29
KRH44436	Soybean	nucleus	75.38	68.06
GSMUA_Achr7P09990_001	Banana	cytosol	66.92	67.97
GSMUA_Achr6P05270_001	Banana	cytosol	67.69	65.67
Os01t0173100-01	Rice	nucleus	76.15	65.13
EES00222	Sorghum	cytosol, nucleus, plastid	73.08	64.63
VIT_04s0023g02330.t01	Wine grape	cytosol	71.54	63.27
TraesCS1B01G135500.1	Wheat	cytosol, nucleus, plastid	64.62	63.16
TraesCS1A01G115600.1	Wheat	cytosol, nucleus, plastid	65.38	62.96
TraesCS1D01G117000.1	Wheat	cytosol	64.62	62.69
KRH47470	Soybean	nucleus	65.38	61.59
TraesCS3B01G148300.1	Wheat	cytosol, nucleus, plastid	70.0	59.48
TraesCS3D01G130100.1	Wheat	cytosol, nucleus, plastid	70.77	59.35
TraesCS3A01G129200.1	Wheat	cytosol, nucleus, plastid	70.77	59.35
EES19123	Sorghum	nucleus	59.23	57.46
HORVU7Hr1G084100.1	Barley	mitochondrion	73.85	57.14
CDY00026	Canola	cytosol, nucleus, plastid	51.54	54.47
CDY57017	Canola	cytosol, nucleus, plastid	49.23	52.03
CDY41887	Canola	cytosol	59.23	50.66
CDY50744	Canola	cytosol	58.46	50.0
CDY40664	Canola	cytosol	61.54	49.69
CDX74179	Canola	cytosol	62.31	49.39
HORVU1Hr1G025500.1	Barley	cytosol, nucleus, plastid	61.54	48.48
CDY21118	Canola	cytosol	57.69	48.08
Zm00001d046401_P001	Maize	cytosol, nucleus, plasma membrane	36.15	47.0
CDY30010	Canola	cytosol	56.92	46.54
CDX86203	Canola	cytosol	54.62	45.81
GSMUA_Achr7P10060_001	Banana	extracellular	37.69	42.98
Zm00001d039663_P005	Maize	nucleus, peroxisome, plastid	63.08	41.21
Zm00001d009798_P001	Maize	cytosol	54.62	38.59
Zm00001d008731_P001	Maize	nucleus, plasma membrane, vacuole	50.77	27.39
CDY28657	Canola	mitochondrion	40.77	26.63
CDX79500	Canola	cytosol	36.15	26.55
CDY68615	Canola	nucleus, plastid	39.23	23.83
CDY53532	Canola	nucleus	38.46	21.19

Protein Annotations

EnsemblPlants:CDY15644	EnsemblPlantsGene:GSBRNA2T00089841001	Gene3D:3.30.110.20	GO:A0A078FRY1	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:Alba-like_dom_sf	InterPro:DNA/RNA-bd_Alba-like	InterPro:IPR036882	InterPro:UCP030333_Alba	ncoils:Coil
PANTHER:PTHR31947	PANTHER:PTHR31947:SF11	PFAM:PF01918	PIRSF:PIRSF030333	ProteinID:CDY15644	ProteinID:CDY15644.1
SEG:seg	SUPFAM:SSF82704	UniParc:UPI000254109C	UniProt:A0A078FRY1	MapMan:15.3.7.2.1	:

Description

BnaA07g08150DBnaA07g08150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRY1]

Coordinates

chrLK032056:-:104041..105415

Molecular Weight (calculated)

14432.3 Da

IEP (calculated)

5.967

GRAVY (calculated)

-0.402

Length

130 amino acids

Sequence
(BLAST)

001: MEGITEGVNS MSLGVDTQKK NRIQVSHTKK PLFFYVNLAK RYMQQYSDVE LSALGMAIAT VVTVAEILKN NGFAVEKKIM TSTVDIKDDS RGRPVQKAKI
101: EITLSKSEKF DELMAAANEE KEAAEAQEQS

Best Arabidopsis Sequence Match ( AT2G34160.1 )
(BLAST)

001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN

Arabidopsis Description

Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.