Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 93.02 | 92.31 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 89.15 | 87.79 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 84.5 | 85.83 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 85.27 | 85.27 |
| KRH23562 | Soybean | nucleus | 87.6 | 84.96 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 86.82 | 84.85 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 85.27 | 83.97 |
| Os06t0602600-01 | Rice | nucleus | 84.5 | 82.58 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 82.17 | 82.17 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 82.17 | 82.17 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 83.72 | 81.82 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 82.95 | 81.06 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 82.95 | 81.06 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 86.82 | 79.43 |
| CDY17226 | Canola | nucleus | 79.84 | 79.23 |
| Bra005449.1-P | Field mustard | nucleus | 79.84 | 79.23 |
| CDY63142 | Canola | nucleus | 79.84 | 79.23 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 85.27 | 79.14 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 79.07 | 78.46 |
| KRH44436 | Soybean | nucleus | 86.82 | 77.78 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 83.72 | 77.7 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 83.72 | 77.7 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 82.95 | 76.98 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 76.74 | 76.15 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 76.74 | 76.15 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 76.74 | 76.15 |
| AT2G34160.1 | Thale cress | cytosol | 75.97 | 75.38 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 75.97 | 75.38 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 75.97 | 75.38 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 75.97 | 75.38 |
| Os02t0202500-01 | Rice | nucleus | 40.31 | 75.36 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 75.19 | 74.62 |
| CDX90176 | Canola | nucleus | 74.42 | 73.85 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 74.42 | 73.85 |
| Bra010843.1-P | Field mustard | nucleus | 74.42 | 73.85 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 83.72 | 73.47 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 72.09 | 72.66 |
| KRH47470 | Soybean | nucleus | 75.97 | 71.01 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 73.64 | 70.9 |
| EES00222 | Sorghum | cytosol, nucleus, plastid | 75.97 | 66.67 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 68.22 | 65.67 |
| TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 67.44 | 65.41 |
| TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 68.22 | 65.19 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 83.72 | 64.29 |
| Os01t0173100-01 | Rice | nucleus | 74.42 | 63.16 |
| EES19123 | Sorghum | nucleus | 63.57 | 61.19 |
| TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 70.54 | 59.48 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 69.77 | 58.06 |
| TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 68.99 | 57.42 |
| VIT_05s0020g04890.t01 | Wine grape | cytosol | 58.14 | 52.08 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 38.76 | 50.0 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 63.57 | 49.7 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 41.86 | 47.37 |
| Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 65.89 | 42.71 |
| Zm00001d009798_P001 | Maize | cytosol | 56.59 | 39.67 |
| Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 54.26 | 29.05 |
Protein Annotations
| EntrezGene:100252596 | wikigene:100252596 | MapMan:15.3.7.2.1 | Gene3D:3.30.110.20 | InterPro:Alba-like_dom_sf | ProteinID:CBI36290 |
| ProteinID:CBI36290.3 | UniProt:D7U0Z4 | InterPro:DNA/RNA-bd_Alba-like | EMBL:FN596494 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR036882 | EntrezGene:LOC100252596 | wikigene:LOC100252596 | PFAM:PF01918 | PIRSF:PIRSF030333 |
| PANTHER:PTHR31947 | PANTHER:PTHR31947:SF11 | SUPFAM:SSF82704 | TIGR:TC56917 | InterPro:UCP030333_Alba | UniParc:UPI00015CD31B |
| ArrayExpress:VIT_09s0002g06460 | EnsemblPlantsGene:VIT_09s0002g06460 | EnsemblPlants:VIT_09s0002g06460.t01 | RefSeq:XP_002270136 | RefSeq:XP_002270136.1 | SEG:seg |
Description
No Description!
Coordinates
chr9:+:6407252..6412845
Molecular Weight (calculated)
14390.3 Da
IEP (calculated)
5.293
GRAVY (calculated)
-0.374
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEITEAVNN INISDLHKKN RIQVSNTKKP LFFYVNLAKR YMQQHNEVEL SALGMAIATV VTIAEILKNN GLAVEKKITT STVDMKDESR GRPVQKAKIE
101: ILLGKTANFD ELMAAAAEER EAGDVEEQS
101: ILLGKTANFD ELMAAAAEER EAGDVEEQS
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.