Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_11s0016g05100.t01 | Wine grape | nucleus | 77.55 | 87.69 |
VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 73.47 | 83.72 |
GSMUA_Achr6P00670_001 | Banana | nucleus | 70.07 | 81.1 |
GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 70.75 | 80.62 |
GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 70.75 | 79.39 |
GSMUA_Achr7P08310_001 | Banana | cytosol | 70.07 | 78.03 |
Bra005449.1-P | Field mustard | nucleus | 68.71 | 77.69 |
CDY63142 | Canola | nucleus | 68.71 | 77.69 |
CDY17226 | Canola | nucleus | 68.71 | 77.69 |
GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 68.03 | 77.52 |
TraesCS7A01G374500.1 | Wheat | nucleus | 68.71 | 76.52 |
Os06t0602600-01 | Rice | nucleus | 68.71 | 76.52 |
TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 68.71 | 76.52 |
TraesCS7B01G252900.1 | Wheat | cytosol | 68.03 | 75.76 |
AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 66.67 | 75.38 |
EER88613 | Sorghum | cytosol, nucleus, plastid | 65.99 | 75.19 |
AT2G34160.1 | Thale cress | cytosol | 65.99 | 74.62 |
TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 68.03 | 71.94 |
TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 68.03 | 71.94 |
Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 68.03 | 71.94 |
Bra010843.1-P | Field mustard | nucleus | 63.27 | 71.54 |
Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 63.27 | 71.54 |
CDX90176 | Canola | nucleus | 63.27 | 71.54 |
CDY50785 | Canola | cytosol, nucleus, plastid | 63.27 | 71.54 |
CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 63.27 | 71.54 |
TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 67.35 | 71.22 |
EES06481 | Sorghum | cytosol, nucleus, plastid | 68.03 | 70.92 |
CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 62.59 | 70.77 |
CDY43326 | Canola | cytosol, nucleus, plastid | 62.59 | 70.77 |
CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 62.59 | 70.77 |
Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 62.59 | 70.77 |
Os02t0202500-01 | Rice | nucleus | 32.65 | 69.57 |
GSMUA_Achr7P09990_001 | Banana | cytosol | 60.54 | 69.53 |
Solyc06g068050.2.1 | Tomato | nucleus | 59.86 | 69.29 |
CDX99800 | Canola | cytosol, nucleus, plastid | 61.22 | 69.23 |
PGSC0003DMT400073472 | Potato | cytosol | 59.18 | 68.5 |
GSMUA_Achr6P05270_001 | Banana | cytosol | 61.22 | 67.16 |
EES00222 | Sorghum | cytosol, nucleus, plastid | 62.59 | 62.59 |
HORVU7Hr1G084100.1 | Barley | mitochondrion | 69.39 | 60.71 |
Os01t0173100-01 | Rice | nucleus | 61.9 | 59.87 |
TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 61.22 | 58.82 |
TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 53.06 | 58.65 |
TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 53.74 | 58.52 |
TraesCS1D01G117000.1 | Wheat | cytosol | 53.06 | 58.21 |
EES19123 | Sorghum | nucleus | 52.38 | 57.46 |
TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 60.54 | 57.42 |
TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 59.18 | 56.13 |
VIT_05s0020g04890.t01 | Wine grape | cytosol | 48.3 | 49.31 |
Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 32.65 | 48.0 |
HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 51.7 | 46.06 |
GSMUA_Achr7P10060_001 | Banana | extracellular | 35.37 | 45.61 |
Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 53.74 | 39.7 |
Zm00001d009798_P001 | Maize | cytosol | 48.3 | 38.59 |
Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 44.9 | 27.39 |
Protein Annotations
EntrezGene:100247364 | wikigene:100247364 | MapMan:15.3.7.2.1 | Gene3D:3.30.110.20 | InterPro:Alba-like_dom_sf | ProteinID:CCB44424 |
ProteinID:CCB44424.1 | InterPro:DNA/RNA-bd_Alba-like | UniProt:F6GWT9 | EMBL:FN594959 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0005488 | InterPro:IPR036882 | EntrezGene:LOC100247364 | wikigene:LOC100247364 | PFAM:PF01918 | PIRSF:PIRSF030333 |
PANTHER:PTHR31947 | PANTHER:PTHR31947:SF11 | SUPFAM:SSF82704 | InterPro:UCP030333_Alba | UniParc:UPI0002109501 | ArrayExpress:VIT_04s0023g02330 |
EnsemblPlantsGene:VIT_04s0023g02330 | EnsemblPlants:VIT_04s0023g02330.t01 | RefSeq:XP_002264067 | RefSeq:XP_002264067.2 | : | : |
Description
No Description!
Coordinates
chr4:-:18825883..18831569
Molecular Weight (calculated)
16411.1 Da
IEP (calculated)
9.497
GRAVY (calculated)
-0.218
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYAVEEITK GVNNMNIADS HKKNQIQVSN TKKPLFFYVN LAKRHMQQHN EVELSALGMA IATVVTIAEI LKNNGLVVEK KIMTSTVDMK DESRGRPIQK
101: TKIEILLGKT ENFDELMAAA AEEKWRKMAT IVAMVVIGGG LWQAPPN
101: TKIEILLGKT ENFDELMAAA AEEKWRKMAT IVAMVVIGGG LWQAPPN
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.