Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G252900.1 | Wheat | cytosol | 99.24 | 99.24 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 99.24 | 99.24 |
| Os06t0602600-01 | Rice | nucleus | 90.15 | 90.15 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 84.85 | 86.82 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 84.09 | 86.05 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 84.09 | 86.05 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 83.33 | 84.62 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 84.09 | 84.09 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 81.82 | 83.72 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 79.55 | 82.68 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 80.3 | 80.92 |
| KRH23562 | Soybean | nucleus | 79.55 | 78.95 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 78.03 | 78.63 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 82.58 | 78.42 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 99.24 | 77.98 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 75.0 | 76.15 |
| CDY63142 | Canola | nucleus | 74.24 | 75.38 |
| CDY17226 | Canola | nucleus | 74.24 | 75.38 |
| Bra005449.1-P | Field mustard | nucleus | 74.24 | 75.38 |
| Solyc06g068050.2.1 | Tomato | nucleus | 71.21 | 74.02 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 72.73 | 73.85 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 72.73 | 73.85 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 72.73 | 73.85 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 71.21 | 73.44 |
| AT2G34160.1 | Thale cress | cytosol | 71.97 | 73.08 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 71.97 | 73.08 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 71.97 | 73.08 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 71.97 | 73.08 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 71.97 | 73.08 |
| PGSC0003DMT400073472 | Potato | cytosol | 69.7 | 72.44 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 71.21 | 72.31 |
| Bra010843.1-P | Field mustard | nucleus | 71.21 | 72.31 |
| CDX90176 | Canola | nucleus | 71.21 | 72.31 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 72.73 | 71.64 |
| KRH44436 | Soybean | nucleus | 76.52 | 70.14 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 76.52 | 68.71 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 67.42 | 66.42 |
| KRH47470 | Soybean | nucleus | 66.67 | 63.77 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 72.73 | 61.94 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 40.15 | 53.0 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 40.15 | 46.49 |
| TraesCS3D01G432100.1 | Wheat | nucleus | 55.3 | 38.62 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G348900.1 | EnsemblPlantsGene:TraesCS7D01G348900 | Gene3D:3.30.110.20 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:Alba-like_dom_sf | InterPro:DNA/RNA-bd_Alba-like | InterPro:IPR036882 | InterPro:UCP030333_Alba | PANTHER:PTHR31947 | PANTHER:PTHR31947:SF12 |
| PFAM:PF01918 | PIRSF:PIRSF030333 | SEG:seg | SUPFAM:SSF82704 | MapMan:15.3.7.2.1 | : |
Description
No Description!
Coordinates
chr7D:+:448756288..448757874
Molecular Weight (calculated)
14621.6 Da
IEP (calculated)
4.871
GRAVY (calculated)
-0.367
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVTEGVKN LAVTEPHKKN RIQVSNTKKP LFFYVNLAKR YMQMHNEVEL SALGMAIATV VTVAEILKNN GLAVEKKIMT STVDVNDESR GRPMQKAKIE
101: IVLGKTENFD ELMAAAAEER EVAAAEDGEE QG
101: IVLGKTENFD ELMAAAAEER EVAAAEDGEE QG
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.