Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 77.98 | 99.24 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 77.38 | 98.48 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 77.38 | 98.48 |
| Os06t0602600-01 | Rice | nucleus | 70.24 | 89.39 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 66.67 | 86.82 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 66.07 | 86.05 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 66.07 | 86.05 |
| VIT_11s0016g05100.t01 | Wine grape | nucleus | 65.48 | 84.62 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 66.07 | 84.09 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 64.29 | 83.72 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 62.5 | 82.68 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 63.1 | 80.92 |
| KRH23562 | Soybean | nucleus | 62.5 | 78.95 |
| KRH09747 | Soybean | cytosol, nucleus, plasma membrane | 61.31 | 78.63 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 58.93 | 76.15 |
| CDY17226 | Canola | nucleus | 58.33 | 75.38 |
| CDY63142 | Canola | nucleus | 58.33 | 75.38 |
| Bra005449.1-P | Field mustard | nucleus | 58.33 | 75.38 |
| Solyc06g068050.2.1 | Tomato | nucleus | 55.95 | 74.02 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 57.14 | 73.85 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 57.14 | 73.85 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 57.14 | 73.85 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 55.95 | 73.44 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 56.55 | 73.08 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 56.55 | 73.08 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 56.55 | 73.08 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 56.55 | 73.08 |
| AT2G34160.1 | Thale cress | cytosol | 56.55 | 73.08 |
| PGSC0003DMT400073472 | Potato | cytosol | 54.76 | 72.44 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 55.95 | 72.31 |
| CDX90176 | Canola | nucleus | 55.95 | 72.31 |
| Bra010843.1-P | Field mustard | nucleus | 55.95 | 72.31 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 57.14 | 71.64 |
| KRH44436 | Soybean | nucleus | 60.12 | 70.14 |
| VIT_04s0023g02330.t01 | Wine grape | cytosol | 60.71 | 69.39 |
| KRH47470 | Soybean | nucleus | 53.57 | 65.22 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 31.55 | 53.0 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 50.6 | 51.52 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 31.55 | 46.49 |
| HORVU3Hr1G095800.1 | Barley | nucleus | 45.83 | 40.74 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G084100.1 | EnsemblPlantsGene:HORVU7Hr1G084100 | Gene3D:3.30.110.20 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:Alba-like_dom_sf | InterPro:DNA/RNA-bd_Alba-like | InterPro:IPR036882 | InterPro:UCP030333_Alba | PANTHER:PTHR31947 | PANTHER:PTHR31947:SF12 |
| PFAM:PF01918 | PIRSF:PIRSF030333 | SEG:seg | SUPFAM:SSF82704 | UniParc:UPI000B4653C0 | UniProt:A0A287X4S1 |
| MapMan:15.3.7.2.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:506517779..506519749
Molecular Weight (calculated)
18479.3 Da
IEP (calculated)
7.516
GRAVY (calculated)
-0.224
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: SYFLAWCSLV SRGGGVGGFA SALLRARVSR FRARGEMEEV TEGVKNLAVT EPHKKNRIQV SNTKKPLFFY VNLAKRYMQM HNEVELSALG MAIATVVTVA
101: EILKNNGLAV EKKIMTSTVD VNDESRGRPM QKAKIEIVLG KTENFDELMA AAAEEREVAA AEDGEEQA
101: EILKNNGLAV EKKIMTSTVD VNDESRGRPM QKAKIEIVLG KTENFDELMA AAAEEREVAA AEDGEEQA
001: MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
101: EITLVKSEKF DELMAAANEE KEDAEAQVQN
Arabidopsis Description
Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.