Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23562 | Soybean | nucleus | 91.6 | 90.23 |
| VIT_09s0002g06460.t01 | Wine grape | cytosol, nucleus, plastid | 87.79 | 89.15 |
| KRH44436 | Soybean | nucleus | 90.84 | 82.64 |
| EER88613 | Sorghum | cytosol, nucleus, plastid | 80.92 | 82.17 |
| GSMUA_Achr6P00670_001 | Banana | nucleus | 79.39 | 81.89 |
| GSMUA_Achr6P05140_001 | Banana | cytosol, nucleus, plastid | 80.15 | 81.4 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 77.86 | 79.07 |
| GSMUA_Achr7P08310_001 | Banana | cytosol | 79.39 | 78.79 |
| GSMUA_Achr2P17110_001 | Banana | cytosol, nucleus, plasma membrane | 78.63 | 78.63 |
| AT1G29250.1 | Thale cress | cytosol, nucleus, plastid | 77.86 | 78.46 |
| TraesCS7D01G348900.1 | Wheat | cytosol, nucleus, plastid | 78.63 | 78.03 |
| Os06t0602600-01 | Rice | nucleus | 77.86 | 77.27 |
| TraesCS7A01G374500.1 | Wheat | nucleus | 77.86 | 77.27 |
| TraesCS7B01G252900.1 | Wheat | cytosol | 77.86 | 77.27 |
| Bra030127.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 76.34 | 76.92 |
| Bra005449.1-P | Field mustard | nucleus | 76.34 | 76.92 |
| CDY50785 | Canola | cytosol, nucleus, plastid | 76.34 | 76.92 |
| CDY17226 | Canola | nucleus | 76.34 | 76.92 |
| CDY15644 | Canola | cytosol, endoplasmic reticulum, nucleus | 76.34 | 76.92 |
| CDY63142 | Canola | nucleus | 76.34 | 76.92 |
| Bra032296.1-P | Field mustard | cytosol, nucleus, plastid | 75.57 | 76.15 |
| AT2G34160.1 | Thale cress | cytosol | 75.57 | 76.15 |
| CDX94654 | Canola | cytosol, endoplasmic reticulum, nucleus | 75.57 | 76.15 |
| CDY15643 | Canola | cytosol, endoplasmic reticulum, nucleus | 75.57 | 76.15 |
| KRH47470 | Soybean | nucleus | 80.15 | 76.09 |
| CDY43326 | Canola | cytosol, nucleus, plastid | 74.81 | 75.38 |
| CDX99800 | Canola | cytosol, nucleus, plastid | 74.05 | 74.62 |
| CDX90176 | Canola | nucleus | 74.05 | 74.62 |
| Bra010843.1-P | Field mustard | nucleus | 74.05 | 74.62 |
| PGSC0003DMT400073472 | Potato | cytosol | 71.76 | 74.02 |
| Os02t0202500-01 | Rice | nucleus | 38.93 | 73.91 |
| TraesCS6D01G168100.1 | Wheat | cytosol, nucleus, plastid | 77.86 | 73.38 |
| TraesCS6B01G209900.1 | Wheat | cytosol, nucleus, plastid | 77.86 | 73.38 |
| Zm00001d053625_P001 | Maize | extracellular, plasma membrane | 77.86 | 73.38 |
| Solyc06g068050.2.1 | Tomato | nucleus | 70.99 | 73.23 |
| EES06481 | Sorghum | cytosol, nucleus, plastid | 78.63 | 73.05 |
| TraesCS6A01G175200.1 | Wheat | cytosol, nucleus, plastid | 77.1 | 72.66 |
| GSMUA_Achr7P09990_001 | Banana | cytosol | 69.47 | 71.09 |
| GSMUA_Achr6P05270_001 | Banana | cytosol | 70.99 | 69.4 |
| TraesCS1B01G135500.1 | Wheat | cytosol, nucleus, plastid | 67.94 | 66.92 |
| EES00222 | Sorghum | cytosol, nucleus, plastid | 74.81 | 66.67 |
| TraesCS1D01G117000.1 | Wheat | cytosol | 67.18 | 65.67 |
| TraesCS1A01G115600.1 | Wheat | cytosol, nucleus, plastid | 67.18 | 65.19 |
| KRH34103 | Soybean | plastid | 63.36 | 62.88 |
| Os01t0173100-01 | Rice | nucleus | 72.52 | 62.5 |
| KRG92697 | Soybean | plastid | 62.6 | 62.12 |
| HORVU7Hr1G084100.1 | Barley | mitochondrion | 78.63 | 61.31 |
| EES19123 | Sorghum | nucleus | 62.6 | 61.19 |
| TraesCS3B01G148300.1 | Wheat | cytosol, nucleus, plastid | 70.99 | 60.78 |
| TraesCS3D01G130100.1 | Wheat | cytosol, nucleus, plastid | 71.76 | 60.65 |
| TraesCS3A01G129200.1 | Wheat | cytosol, nucleus, plastid | 70.23 | 59.35 |
| KRG96999 | Soybean | nucleus | 58.02 | 58.91 |
| KRH68751 | Soybean | plastid | 59.54 | 56.52 |
| Zm00001d046401_P001 | Maize | cytosol, nucleus, plasma membrane | 39.69 | 52.0 |
| HORVU1Hr1G025500.1 | Barley | cytosol, nucleus, plastid | 64.12 | 50.91 |
| KRH77811 | Soybean | cytosol | 46.56 | 46.21 |
| GSMUA_Achr7P10060_001 | Banana | extracellular | 39.69 | 45.61 |
| Zm00001d039663_P005 | Maize | nucleus, peroxisome, plastid | 64.89 | 42.71 |
| Zm00001d009798_P001 | Maize | cytosol | 58.78 | 41.85 |
| Zm00001d008731_P001 | Maize | nucleus, plasma membrane, vacuole | 53.44 | 29.05 |
Protein Annotations
| EntrezGene:100527472 | MapMan:15.3.7.2.1 | Gene3D:3.30.110.20 | EMBL:ACUP02009109 | InterPro:Alba-like_dom_sf | EMBL:BT092315 |
| UniProt:C6T4F4 | InterPro:DNA/RNA-bd_Alba-like | EnsemblPlantsGene:GLYMA_15G009400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR036882 | EnsemblPlants:KRH09747 | ProteinID:KRH09747 | ProteinID:KRH09747.1 | PFAM:PF01918 | PIRSF:PIRSF030333 |
| PANTHER:PTHR31947 | PANTHER:PTHR31947:SF11 | SUPFAM:SSF82704 | InterPro:UCP030333_Alba | UniParc:UPI0001B15900 | SEG:seg |
Description
hypothetical protein
Coordinates
chr15:-:732849..735829
Molecular Weight (calculated)
14529.3 Da
IEP (calculated)
5.003
GRAVY (calculated)
-0.427
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDITEGVNN INISDSYKKN RIQVSNTKKP LFFYVNLAKR YMQQHDEVEL SALGMAIATV VTVAEILKNN RLAVEKKIRT STVDIKDDSR GRPVQKAKIE
101: IVLGKTANFD ELMAAAAAED GENGDVEEQS A
101: IVLGKTANFD ELMAAAAAED GENGDVEEQS A
001: MEEITEGVNN MNLAVDTQKK NRIQVSNTKK PLFFYVNLAK RYMQQYTDVE LSALGMAIAT VVTVAEILKN NGFAVEKKIM TSTVDIKDDS RGRPVQKAKI
101: EITLAKSEKF DELMAAANEE KEAAEAQEQN
101: EITLAKSEKF DELMAAANEE KEAAEAQEQN
Arabidopsis Description
Alba DNA/RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q9LP53]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.