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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:cytosol
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
PTS1:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX69311 cytosol
CDX69768
CDX70711
CDX73678
CDX75659 cytosol
CDX77145
CDX78706
CDX80988 cytoskeleton, cytosol
CDX82211
CDX83953 nucleus
CDX92401
CDX95314
CDX96819 nucleus
CDX97090
CDX98292
CDY02587
CDY04139
CDY04295
CDY04980 cytoskeleton, cytosol
CDY06213
CDY06478
CDY09484
CDY10634
CDY11354 cytoskeleton, cytosol
CDY14091 cytoskeleton, cytosol
CDY16998
CDY17426
CDY17797
CDY23174
CDY27534
CDY30517
CDY32413
CDY33338 nucleus
CDY33397
CDY35083 nucleus
CDY37308
CDY37406
CDY37408
CDY70356

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20930.1 CDX83953 AT1G16330.1 20407024
AT1G20930.1 CDX96819 AT1G16330.1 20407024
AT1G20930.1 CDY33338 AT1G16330.1 20407024
AT1G20930.1 CDY35083 AT1G16330.1 20407024
AT1G20930.1 CDY16998 AT1G47870.1 20407024
AT1G20930.1 CDY17797 AT1G47870.1 20407024
AT1G20930.1 CDX82211 AT1G51650.1 20706207
AT1G20930.1 CDX98292 AT1G51650.1 20706207
AT1G20930.1 CDY02587 AT1G51650.1 20706207
AT1G20930.1 CDY27534 AT1G51650.1 20706207
AT1G20930.1 CDY32413 AT1G51650.1 20706207
AT1G20930.1 CDY37308 AT1G51650.1 20706207
AT1G20930.1 CDY04295 AT2G05830.1 20706207
AT1G20930.1 CDY09484 AT2G05830.1 20706207
AT1G20930.1 CDY33397 AT2G05830.1 20706207
AT1G20930.1 CDY70356 AT2G05830.1 20706207
AT1G20930.1 CDX77145 AT2G27970.1 20407024
AT1G20930.1 CDY30517 AT2G27970.1 20407024
AT1G20930.1 CDX70711 AT3G11270.1 20706207
AT1G20930.1 CDX78706 AT3G11270.1 20706207
AT1G20930.1 CDY04139 AT3G11270.1 20706207
AT1G20930.1 CDY06213 AT3G11270.1 20706207
AT1G20930.1 CDY17426 AT3G11270.1 20706207
AT1G20930.1 CDY10634 AT3G22310.1 20706207
AT1G20930.1 CDY37406 AT3G22310.1 20706207
AT1G20930.1 CDY37408 AT3G22310.1 20706207
AT1G20930.1 CDX73678 AT3G51920.1 17360592
AT1G20930.1 CDX95314 AT3G51920.1 17360592
AT1G20930.1 CDY23174 AT3G51920.1 17360592
AT1G20930.1 CDY06478 AT4G14640.1 17360592
AT1G20930.1 CDX69311 AT4G37490.1 20407024
AT1G20930.1 CDX75659 AT4G37490.1 20407024
AT1G20930.1 CDX80988 AT5G06150.1 20407024
AT1G20930.1 CDY04980 AT5G06150.1 20407024
AT1G20930.1 CDY11354 AT5G06150.1 20407024
AT1G20930.1 CDY14091 AT5G06150.1 20407024
AT1G20930.1 CDX80988 AT5G06150.1 20407024
AT1G20930.1 CDY04980 AT5G06150.1 20407024
AT1G20930.1 CDY11354 AT5G06150.1 20407024
AT1G20930.1 CDY14091 AT5G06150.1 20407024
AT1G20930.1 CDX69768 AT5G11300.1 20407024
AT1G20930.1 CDX97090 AT5G11300.1 20407024
AT1G20930.1 CDX92401 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012258.1-P Field mustard cytosol 100.0 100.0
CDY01345 Canola cytosol 100.0 100.0
AT1G20930.1 Thale cress cytosol 94.94 95.24
CDX87588 Canola cytosol 86.08 86.9
CDX88294 Canola cytosol 85.13 85.94
KRH37522 Soybean cytosol 85.76 85.49
KRH06014 Soybean cytosol 84.18 84.71
KRH48128 Soybean cytosol 83.86 84.13
GSMUA_Achr3P03700_001 Banana cytosol 77.85 81.46
Solyc04g082840.2.1 Tomato cytosol 80.7 80.95
PGSC0003DMT400025910 Potato cytosol 80.7 80.95
VIT_18s0122g00550.t01 Wine grape cytosol 82.59 80.81
KRH17547 Soybean cytosol 84.18 78.93
GSMUA_Achr9P12350_001 Banana cytosol 74.37 72.98
TraesCS7D01G247700.1 Wheat cytosol 75.0 72.7
TraesCS7A01G248700.1 Wheat cytosol 75.0 72.7
TraesCS7B01G142600.1 Wheat cytosol 75.0 72.7
Os08t0512600-01 Rice cytosol, plasma membrane 74.37 72.09
GSMUA_Achr11P... Banana cytosol 75.95 71.86
EER90152 Sorghum cytosol, mitochondrion, peroxisome 73.42 71.38
Zm00001d031485_P001 Maize mitochondrion 73.73 70.82
Zm00001d046912_P001 Maize cytosol, mitochondrion, peroxisome 72.78 70.77
CDX76164 Canola cytosol 63.92 66.45
CDY13189 Canola cytosol 63.92 66.45
HORVU7Hr1G051180.3 Barley cytosol 68.67 64.97
CDY07716 Canola cytosol 63.29 64.72
CDY62439 Canola cytosol, nucleus, plasma membrane 62.97 64.19
CDX68497 Canola cytosol 51.27 55.1
OQU80908 Sorghum mitochondrion 73.42 54.98
CDX83047 Canola cytosol 51.27 51.92
CDX87018 Canola cytosol 38.92 51.9
CDY66197 Canola cytosol 50.63 47.34
CDY05870 Canola cytosol, plastid 50.63 42.22
CDY69065 Canola cytosol 19.3 40.13
CDY45733 Canola cytosol, plastid, vacuole 19.3 40.13
CDY36228 Canola cytosol 38.92 35.45
CDX96131 Canola cytosol 38.92 35.45
CDY21722 Canola cytosol 40.51 32.9
CDX81858 Canola cytosol 40.19 32.65
CDX96739 Canola cytosol 40.19 32.32
CDX73001 Canola cytosol 40.51 32.24
CDY60132 Canola cytosol 40.19 31.99
CDX83876 Canola cytosol 39.87 31.9
CDX87784 Canola cytosol 25.0 29.7
CDY67496 Canola cytosol 28.16 28.16
CDY60036 Canola cytosol 40.51 27.35
CDX81189 Canola cytosol, nucleus, plastid 36.71 26.67
CDY38979 Canola cytosol 31.65 22.83
CDY09272 Canola cytosol 32.91 22.56
CDY37922 Canola nucleus 37.66 22.45
CDX76497 Canola cytosol 32.59 22.34
CDY49306 Canola cytosol 32.59 21.55
CDY01580 Canola cytosol 31.01 21.26
CDY13047 Canola cytosol 31.01 21.08
CDY56886 Canola nucleus 33.86 20.9
CDY39427 Canola cytosol 31.33 20.62
CDY01821 Canola nucleus 45.25 20.52
CDX96081 Canola nucleus 45.25 20.17
CDY23116 Canola endoplasmic reticulum, nucleus, plasma membrane 31.01 17.41
CDX87783 Canola extracellular, mitochondrion 0.0 0.0
CDY26373 Canola mitochondrion 0.0 0.0
Protein Annotations
Gene3D:1.10.510.10MapMan:13.1.1.2.2MapMan:18.4.3.1.2Gene3D:3.30.200.20GO:A0A078EGX1UniProt:A0A078EGX1
EnsemblPlants:CDY31856ProteinID:CDY31856ProteinID:CDY31856.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00050577001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24056PANTHER:PTHR24056:SF322InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000254157F:::
Description
BnaC07g15060DBnaA07g11180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EGX1]
Coordinates
chrLK032281:+:86639..88451
Molecular Weight (calculated)
35877.8 Da
IEP (calculated)
9.158
GRAVY (calculated)
-0.290
Length
316 amino acids
Sequence
(BLAST)
001: MENNGVKSAA SSAMEAFEKL EKVGEGTYGK VYRAREKATG LIVALKKTRL HEDEEGVPPT TLREISILRM LARDPHIVRL MDVKQGLNKE GKTVLYLVFE
101: YVDTDLKKFI RSFKQAGQNI PQNTVKSLMY QLCKGMAFCH GHGVLHRDLK PHNLLMDRQK MTLKIADLGL ARAFTLPMKK YTHEILTLWY RAPEVLLGAT
201: HYSTAVDMWS VGCIFAELVN KQAIFAGDSE LQQLLSIFRL LGTPNEQVWP GVSKLKDWHE YPQWKPLSLS TAVPNLDESG LDLLSKMLEY EPVKRISAKK
301: AMEHPYFDDL PDKSSL
Best Arabidopsis Sequence Match ( AT1G20930.1 )
(BLAST)
001: MDNNGVKPAV SAMEAFEKLE KVGEGTYGKV YRAREKATGM IVALKKTRLH EDEEGVPPTT LREISILRML ARDPHIVRLM DVKQGINKEG KTVLYLVFEY
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL
Arabidopsis Description
CDKB2-2Cyclin-dependent kinase B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG64]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.