Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra031349.1-P | Field mustard | mitochondrion | 99.17 | 99.17 |
CDY37408 | Canola | mitochondrion | 98.01 | 98.17 |
CDY37406 | Canola | mitochondrion | 80.07 | 94.51 |
CDY46329 | Canola | mitochondrion | 76.41 | 83.79 |
AT3G22310.1 | Thale cress | mitochondrion | 84.72 | 83.61 |
CDY46330 | Canola | nucleus | 40.2 | 82.88 |
Zm00001d008884_P001 | Maize | cytosol | 21.1 | 73.84 |
Zm00001d030797_P001 | Maize | mitochondrion | 23.09 | 66.83 |
Zm00001d048578_P001 | Maize | cytosol | 23.59 | 60.68 |
KRH73571 | Soybean | nucleus | 57.97 | 58.66 |
KRH45952 | Soybean | mitochondrion | 58.64 | 58.35 |
PGSC0003DMT400074131 | Potato | plastid | 48.17 | 58.23 |
Os07t0143700-01 | Rice | plastid | 31.73 | 58.05 |
KRG99044 | Soybean | mitochondrion | 59.47 | 55.68 |
EER97966 | Sorghum | mitochondrion | 55.32 | 55.32 |
VIT_12s0142g00670.t01 | Wine grape | plastid | 60.8 | 54.95 |
HORVU2Hr1G060640.15 | Barley | cytosol | 48.01 | 54.12 |
GSMUA_Achr7P00980_001 | Banana | mitochondrion | 46.18 | 53.67 |
Zm00001d018787_P001 | Maize | mitochondrion | 54.15 | 53.53 |
Solyc07g044760.2.1 | Tomato | plastid | 55.65 | 53.17 |
Zm00001d031050_P002 | Maize | mitochondrion | 52.82 | 52.05 |
EES17375 | Sorghum | mitochondrion | 53.32 | 51.94 |
TraesCS2A01G253700.1 | Wheat | mitochondrion | 53.32 | 51.86 |
Os12t0611200-01 | Rice | nucleus | 53.82 | 51.59 |
TraesCS5B01G052100.1 | Wheat | mitochondrion | 51.0 | 51.42 |
Zm00001d041480_P001 | Maize | mitochondrion | 51.16 | 51.42 |
TraesCS2B01G273300.1 | Wheat | plastid | 52.82 | 51.37 |
TraesCS2D01G254200.1 | Wheat | mitochondrion | 52.82 | 51.37 |
TraesCS5D01G057800.1 | Wheat | mitochondrion | 51.16 | 51.25 |
TraesCS5A01G047300.2 | Wheat | mitochondrion | 51.83 | 50.65 |
Solyc12g006320.1.1 | Tomato | plastid | 53.65 | 50.23 |
HORVU5Hr1G011460.3 | Barley | mitochondrion | 51.99 | 50.08 |
GSMUA_Achr2P13080_001 | Banana | plastid | 56.64 | 46.21 |
CDX80564 | Canola | plastid | 43.52 | 35.99 |
CDY66725 | Canola | plastid | 44.35 | 35.94 |
CDX87045 | Canola | plastid | 44.52 | 35.92 |
CDY05524 | Canola | plastid | 44.02 | 35.91 |
CDY61108 | Canola | plastid | 44.19 | 35.47 |
CDY19766 | Canola | plastid | 44.02 | 34.82 |
CDY28363 | Canola | plastid | 14.95 | 32.85 |
GSMUA_Achr2P13070_001 | Banana | cytosol | 58.31 | 29.7 |
CDX87236 | Canola | nucleus | 29.57 | 27.94 |
CDY16789 | Canola | nucleus | 29.24 | 27.72 |
CDY44172 | Canola | cytosol | 19.44 | 22.03 |
CDY22890 | Canola | cytosol | 19.27 | 21.85 |
CDY34116 | Canola | cytosol | 12.96 | 15.29 |
CDY44622 | Canola | cytosol | 13.62 | 9.49 |
Protein Annotations
MapMan:16.12.2.2.1.4 | Gene3D:3.40.50.300 | GO:A0A078FCF7 | UniProt:A0A078FCF7 | EnsemblPlants:CDY10634 | ProteinID:CDY10634 |
ProteinID:CDY10634.1 | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00048372001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
InterPro:IPR014014 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
PFscan:PS51195 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF326 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 |
SUPFAM:SSF52540 | UniParc:UPI0004EF00A9 | SEG:seg | : | : | : |
Description
BnaA05g17280DBnaA05g17280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCF7]
Coordinates
chrLK032005:+:160188..162842
Molecular Weight (calculated)
63519.1 Da
IEP (calculated)
9.545
GRAVY (calculated)
-0.353
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: MISTVLRRSV LGASRRTQTL SASLTSLNAA LFHHLAPSSS AAATVSDLKS GVALPQTPNP YGVKARDFHF QSGPSEFRAS MASPAGFAAQ DYAPSYDGGD
101: SEESVGSSSN GGDGLAISEL GISPEIVKAL SGRGIDKLFP IQKAVLEPAM QGRDMIGRAR TGTGKTLAFG IPVIDKIIKF NAKHGRGKNP LCLVLAPTRE
201: LARQVEKEFR ESAPSLDTIC LYGGTPIGQQ MRELNYGVDV AVGTPGRIID LMKRGALNLS EVQFIVLDEA DQMLQVGFAE DVEVILQKLP EKRQSMMFSA
301: TMPSWIRSLT KKYLNNPLTI DLVGDSDQKL ADGITMYSIS ADSYGKASII GPLVEAHGKG GKCIVFTQTK RDADRLSYGL AKTFKCEALH GDISQSQRER
401: TLAGFRDGNF NILVATDVAA RGLDVPNVDL VIHYELPNNT ETFVHRTGRT GRAGKKGNAI LIHGPEQSRA VKMIEREVGS KFTELPSIPV ERGSGSMFEG
501: IGGRSGGSYG GGMRDRSSSY GGRSGGYGGG GGSGRYGGDR SEGSGSRYSG GSDRSSGYGG FGSGGSNRSS GGYGGFGSDR SSQSSGRSSF GGFGLKDPNS
601: SY
101: SEESVGSSSN GGDGLAISEL GISPEIVKAL SGRGIDKLFP IQKAVLEPAM QGRDMIGRAR TGTGKTLAFG IPVIDKIIKF NAKHGRGKNP LCLVLAPTRE
201: LARQVEKEFR ESAPSLDTIC LYGGTPIGQQ MRELNYGVDV AVGTPGRIID LMKRGALNLS EVQFIVLDEA DQMLQVGFAE DVEVILQKLP EKRQSMMFSA
301: TMPSWIRSLT KKYLNNPLTI DLVGDSDQKL ADGITMYSIS ADSYGKASII GPLVEAHGKG GKCIVFTQTK RDADRLSYGL AKTFKCEALH GDISQSQRER
401: TLAGFRDGNF NILVATDVAA RGLDVPNVDL VIHYELPNNT ETFVHRTGRT GRAGKKGNAI LIHGPEQSRA VKMIEREVGS KFTELPSIPV ERGSGSMFEG
501: IGGRSGGSYG GGMRDRSSSY GGRSGGYGGG GGSGRYGGDR SEGSGSRYSG GSDRSSGYGG FGSGGSNRSS GGYGGFGSDR SSQSSGRSSF GGFGLKDPNS
601: SY
001: MISTVLRRSI LGTSRRTLAA SVTSINAALF HNLAPAAATV SDLANGATNV KSLPSNSSPF GVKVRDFHVK SVPSEFRSSI VSSAGFAAQE YAPSYENDGG
101: IGDSESVGSS GGGDGLAIAD LGISPEIVKA LKGRGIEKLF PIQKAVLEPA MEGRDMIGRA RTGTGKTLAF GIPIIDKIIK FNAKHGRGKN PQCLVLAPTR
201: ELARQVEKEF RESAPSLDTI CLYGGTPIGQ QMRELNYGID VAVGTPGRII DLMKRGALNL SEVQFVVLDE ADQMLQVGFA EDVEIILQKL PAKRQSMMFS
301: ATMPSWIRSL TKKYLNNPLT IDLVGDSDQK LADGITMYSI AADSYGRASI IGPLVKEHGK GGKCIVFTQT KRDADRLAFG LAKSYKCEAL HGDISQAQRE
401: RTLAGFRDGN FSILVATDVA ARGLDVPNVD LVIHYELPNN TETFVHRTGR TGRAGKKGSA ILIHGQDQTR AVKMIEKEVG SRFNELPSIA VERGSASMFE
501: GVGARSGGSF GGGRSGGGGY GSYGSSSGRS GGGSYGGYGG SSGRSGGGGG SYGGSGGSSS RYSGGSDRSS GFGSFGSGGS SGGFGSDRSS QSSGRSSFGG
601: FGSNDGKRSY
101: IGDSESVGSS GGGDGLAIAD LGISPEIVKA LKGRGIEKLF PIQKAVLEPA MEGRDMIGRA RTGTGKTLAF GIPIIDKIIK FNAKHGRGKN PQCLVLAPTR
201: ELARQVEKEF RESAPSLDTI CLYGGTPIGQ QMRELNYGID VAVGTPGRII DLMKRGALNL SEVQFVVLDE ADQMLQVGFA EDVEIILQKL PAKRQSMMFS
301: ATMPSWIRSL TKKYLNNPLT IDLVGDSDQK LADGITMYSI AADSYGRASI IGPLVKEHGK GGKCIVFTQT KRDADRLAFG LAKSYKCEAL HGDISQAQRE
401: RTLAGFRDGN FSILVATDVA ARGLDVPNVD LVIHYELPNN TETFVHRTGR TGRAGKKGSA ILIHGQDQTR AVKMIEKEVG SRFNELPSIA VERGSASMFE
501: GVGARSGGSF GGGRSGGGGY GSYGSSSGRS GGGSYGGYGG SSGRSGGGGG SYGGSGGSSS RYSGGSDRSS GFGSFGSGGS SGGFGSDRSS QSSGRSSFGG
601: FGSNDGKRSY
Arabidopsis Description
RH9DEAD-box ATP-dependent RNA helicase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.