Factsheet for HORVU5Hr1G011460.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G057800.1	Wheat	mitochondrion	87.84	91.35
TraesCS5A01G047300.2	Wheat	mitochondrion	89.76	91.07
TraesCS5B01G052100.1	Wheat	mitochondrion	86.88	90.95
EES17375	Sorghum	mitochondrion	73.6	74.43
Zm00001d031050_P002	Maize	mitochondrion	72.48	74.14
Zm00001d041480_P001	Maize	mitochondrion	70.72	73.79
Os12t0611200-01	Rice	nucleus	73.76	73.41
KRH14557	Soybean	mitochondrion	31.36	60.68
PGSC0003DMT400074131	Potato	plastid	45.92	57.63
HORVU2Hr1G060640.15	Barley	cytosol	48.16	56.37
CDY37406	Canola	mitochondrion	45.44	55.69
KRH73571	Soybean	nucleus	52.96	55.63
CDY46329	Canola	mitochondrion	48.64	55.37
CDY46330	Canola	nucleus	25.6	54.79
Solyc07g044760.2.1	Tomato	plastid	53.92	53.49
Bra023836.1-P	Field mustard	mitochondrion	52.64	53.32
KRH45952	Soybean	mitochondrion	51.04	52.73
GSMUA_Achr7P00980_001	Banana	mitochondrion	43.52	52.51
Bra031349.1-P	Field mustard	mitochondrion	50.24	52.16
AT3G22330.1	Thale cress	mitochondrion	51.36	52.11
CDY10634	Canola	mitochondrion	50.08	51.99
CDY37408	Canola	mitochondrion	49.76	51.75
VIT_12s0142g00670.t01	Wine grape	plastid	55.04	51.65
AT3G22310.1	Thale cress	mitochondrion	49.92	51.15
KRG99044	Soybean	mitochondrion	52.16	50.7
KRH14556	Soybean	cytosol	23.04	50.17
Solyc12g006320.1.1	Tomato	plastid	51.52	50.08
GSMUA_Achr2P13080_001	Banana	plastid	56.64	47.97
GSMUA_Achr2P13070_001	Banana	cytosol	58.4	30.88
HORVU5Hr1G080170.2	Barley	nucleus	31.36	30.25
HORVU0Hr1G031660.1	Barley	mitochondrion, nucleus	4.96	20.81
HORVU6Hr1G085490.2	Barley	mitochondrion	18.24	19.86

Protein Annotations

MapMan:16.12.2.2.1.4	Gene3D:3.40.50.300	UniProt:A0A287QCE8	InterPro:DEAD/DEAH_box_helicase_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU5Hr1G011460	EnsemblPlants:HORVU5Hr1G011460.3	InterPro:Helicase_ATP-bd
InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR014014	InterPro:P-loop_NTPase	PFAM:PF00270
PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PFscan:PS51195	PANTHER:PTHR24031	PANTHER:PTHR24031:SF296
InterPro:RNA_helicase_DEAD_Q_motif	SMART:SM00487	SMART:SM00490	SUPFAM:SSF52540	UniParc:UPI000B480127	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:30204571..30208530

Molecular Weight (calculated)

64598.0 Da

IEP (calculated)

9.853

GRAVY (calculated)

-0.222

Length

625 amino acids

Sequence
(BLAST)

001: MYAMIRRADP LRRRAASAVL AALLQHPAGP SAAGASALPP QSPLPPSAMW FHSRPGPLGY RETGAARAGA HAQFAADEGW NYEDARKPAG AVSGAGAAAG
101: AKEEGLEVAK LGISSEIVKR LAAKGITKLF PIQKAVLEPA MQGKDMVGRA KTGTGKTLAF GIPIMDAIIR HNEINKPGRL PLAICLAPTR ELAKQVDKEF
201: VDSSPLQTLC VYGGTPIQQQ MRALDYGVDV VVGTPGRVID LLKRGALNLS MVQFVVLDEA DQMLSVGFDE DVEIILNKVP PKRQTLMFSA TMPPWIRKLM
301: QKYLKDPVIV DLVGEDDQKL AEGISLLSIA TENHAKPAVL AQLIQDHAKG GKCIVFTQTK RDADRLSYTM GRTVQCQALH GDITQGQRER TLQGFREGRF
401: STLIATDVAA RGLDIPNVDL VIHYELPNNS EIFVHRSGRT GRAGKKGIAI VMYGYNQSRA VRGIENDVGG KFQELPKINV EGSDLTMASG FDSYGGGGGG
501: GRSRGGGFGG RSGGFGNSSS RGGGLGDSGF GRSGGGFGRS GGGGGGFGDS GFGRSGGGGG GFGDSGFGRS GGGGGFGSSG GFGGSGSGRS GGFGSGSGSS
601: GSSWGGFGSF GAEGNHGSLL CYGVP

Best Arabidopsis Sequence Match ( AT3G22310.1 )
(BLAST)

001: MISTVLRRSI LGTSRRTLAA SVTSINAALF HNLAPAAATV SDLANGATNV KSLPSNSSPF GVKVRDFHVK SVPSEFRSSI VSSAGFAAQE YAPSYENDGG
101: IGDSESVGSS GGGDGLAIAD LGISPEIVKA LKGRGIEKLF PIQKAVLEPA MEGRDMIGRA RTGTGKTLAF GIPIIDKIIK FNAKHGRGKN PQCLVLAPTR
201: ELARQVEKEF RESAPSLDTI CLYGGTPIGQ QMRELNYGID VAVGTPGRII DLMKRGALNL SEVQFVVLDE ADQMLQVGFA EDVEIILQKL PAKRQSMMFS
301: ATMPSWIRSL TKKYLNNPLT IDLVGDSDQK LADGITMYSI AADSYGRASI IGPLVKEHGK GGKCIVFTQT KRDADRLAFG LAKSYKCEAL HGDISQAQRE
401: RTLAGFRDGN FSILVATDVA ARGLDVPNVD LVIHYELPNN TETFVHRTGR TGRAGKKGSA ILIHGQDQTR AVKMIEKEVG SRFNELPSIA VERGSASMFE
501: GVGARSGGSF GGGRSGGGGY GSYGSSSGRS GGGSYGGYGG SSGRSGGGGG SYGGSGGSSS RYSGGSDRSS GFGSFGSGGS SGGFGSDRSS QSSGRSSFGG
601: FGSNDGKRSY

Arabidopsis Description

RH9DEAD-box ATP-dependent RNA helicase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.