Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73571 | Soybean | nucleus | 88.15 | 42.52 |
| KRH45952 | Soybean | mitochondrion | 53.66 | 25.45 |
| KRG99044 | Soybean | mitochondrion | 56.79 | 25.35 |
| EES17375 | Sorghum | mitochondrion | 54.01 | 25.08 |
| HORVU2Hr1G060640.15 | Barley | cytosol | 45.64 | 24.53 |
| Zm00001d031050_P002 | Maize | mitochondrion | 51.57 | 24.22 |
| Zm00001d041480_P001 | Maize | mitochondrion | 49.83 | 23.87 |
| TraesCS5A01G047300.2 | Wheat | mitochondrion | 51.22 | 23.86 |
| TraesCS5D01G057800.1 | Wheat | mitochondrion | 49.83 | 23.79 |
| TraesCS5B01G052100.1 | Wheat | mitochondrion | 49.48 | 23.79 |
| Os12t0611200-01 | Rice | nucleus | 50.87 | 23.25 |
| HORVU5Hr1G011460.3 | Barley | mitochondrion | 50.17 | 23.04 |
| Zm00001d018787_P001 | Maize | mitochondrion | 47.04 | 22.17 |
| EER97966 | Sorghum | mitochondrion | 46.34 | 22.09 |
| TraesCS2A01G253700.1 | Wheat | mitochondrion | 45.64 | 21.16 |
| TraesCS2D01G254200.1 | Wheat | mitochondrion | 45.3 | 21.0 |
| TraesCS2B01G273300.1 | Wheat | plastid | 45.3 | 21.0 |
| GSMUA_Achr2P13080_001 | Banana | plastid | 49.48 | 19.24 |
| KRH33703 | Soybean | plastid | 41.81 | 16.3 |
| KRG90413 | Soybean | plastid | 41.12 | 16.03 |
| KRH68372 | Soybean | nucleus | 42.86 | 15.95 |
| KRG96641 | Soybean | nucleus | 42.16 | 15.69 |
| GSMUA_Achr7P00980_001 | Banana | mitochondrion | 27.18 | 15.06 |
| GSMUA_Achr2P13070_001 | Banana | cytosol | 50.87 | 12.35 |
| KRH35418 | Soybean | endoplasmic reticulum | 28.22 | 11.62 |
| KRG91400 | Soybean | nucleus | 27.87 | 11.54 |
| KRH15843 | Soybean | cytosol | 13.94 | 10.55 |
| KRH15846 | Soybean | nucleus | 14.63 | 7.53 |
| KRH44787 | Soybean | nucleus | 15.33 | 7.13 |
| KRH42587 | Soybean | nucleus | 4.88 | 4.56 |
| Zm00001d008884_P001 | Maize | cytosol | 0.7 | 1.16 |
| Zm00001d030797_P001 | Maize | mitochondrion | 0.7 | 0.96 |
| Zm00001d048578_P001 | Maize | cytosol | 0.7 | 0.85 |
| KRH15837 | Soybean | nucleus | 0.35 | 0.53 |
| Os07t0143700-01 | Rice | plastid | 0.0 | 0.0 |
| KRH14557 | Soybean | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02008504 | EnsemblPlants:KRH14556 | EnsemblPlantsGene:GLYMA_14G0334002 | Gene3D:3.40.50.300 | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:P-loop_NTPase | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF326 | PFAM:PF00271 | PFscan:PS51194 | ProteinID:KRH14556 |
| ProteinID:KRH14556.1 | SEG:seg | SMART:SM00490 | SUPFAM:SSF52540 | UniParc:UPI0006EDFC72 | UniProt:A0A0R0G8U5 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:-:2422873..2425602
Molecular Weight (calculated)
30068.4 Da
IEP (calculated)
10.423
GRAVY (calculated)
-0.745
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: EHAKGGKCIV FTQTKRDADR LSYTMARSVK CEALHGDISQ AQREKTLAGF RNGHFNVLVA TDVASRGLDI PNVDLVIHYD LPNNSEIFVH RSGRTGRAGK
101: KGTAILVYTE DQSRAVKLIE RDVGSRFTEL PRIAVDSASV DMVGGMGGGR FGSFGGTRDR RYGDTGFGSG RSGGYSNPGS GRSSFGNSGE RFGGQNYNRF
201: GSGNSSGEMN RYGGPSSGRF GSSGGYGSGQ SGSRSGGSSS GSRFSRSDDF GGFGGSDRSG GFGDFGSGEP SGFGGSRGSN QNNRRPF
101: KGTAILVYTE DQSRAVKLIE RDVGSRFTEL PRIAVDSASV DMVGGMGGGR FGSFGGTRDR RYGDTGFGSG RSGGYSNPGS GRSSFGNSGE RFGGQNYNRF
201: GSGNSSGEMN RYGGPSSGRF GSSGGYGSGQ SGSRSGGSSS GSRFSRSDDF GGFGGSDRSG GFGDFGSGEP SGFGGSRGSN QNNRRPF
001: MISTVLRRSI LGTSRRTLAA SVTSINAALF HNLAPAAATV SDLANGATNV KSLPSNSSPF GVKVRDFHVK SVPSEFRSSI VSSAGFAAQE YAPSYENDGG
101: IGDSESVGSS GGGDGLAIAD LGISPEIVKA LKGRGIEKLF PIQKAVLEPA MEGRDMIGRA RTGTGKTLAF GIPIIDKIIK FNAKHGRGKN PQCLVLAPTR
201: ELARQVEKEF RESAPSLDTI CLYGGTPIGQ QMRELNYGID VAVGTPGRII DLMKRGALNL SEVQFVVLDE ADQMLQVGFA EDVEIILQKL PAKRQSMMFS
301: ATMPSWIRSL TKKYLNNPLT IDLVGDSDQK LADGITMYSI AADSYGRASI IGPLVKEHGK GGKCIVFTQT KRDADRLAFG LAKSYKCEAL HGDISQAQRE
401: RTLAGFRDGN FSILVATDVA ARGLDVPNVD LVIHYELPNN TETFVHRTGR TGRAGKKGSA ILIHGQDQTR AVKMIEKEVG SRFNELPSIA VERGSASMFE
501: GVGARSGGSF GGGRSGGGGY GSYGSSSGRS GGGSYGGYGG SSGRSGGGGG SYGGSGGSSS RYSGGSDRSS GFGSFGSGGS SGGFGSDRSS QSSGRSSFGG
601: FGSNDGKRSY
101: IGDSESVGSS GGGDGLAIAD LGISPEIVKA LKGRGIEKLF PIQKAVLEPA MEGRDMIGRA RTGTGKTLAF GIPIIDKIIK FNAKHGRGKN PQCLVLAPTR
201: ELARQVEKEF RESAPSLDTI CLYGGTPIGQ QMRELNYGID VAVGTPGRII DLMKRGALNL SEVQFVVLDE ADQMLQVGFA EDVEIILQKL PAKRQSMMFS
301: ATMPSWIRSL TKKYLNNPLT IDLVGDSDQK LADGITMYSI AADSYGRASI IGPLVKEHGK GGKCIVFTQT KRDADRLAFG LAKSYKCEAL HGDISQAQRE
401: RTLAGFRDGN FSILVATDVA ARGLDVPNVD LVIHYELPNN TETFVHRTGR TGRAGKKGSA ILIHGQDQTR AVKMIEKEVG SRFNELPSIA VERGSASMFE
501: GVGARSGGSF GGGRSGGGGY GSYGSSSGRS GGGSYGGYGG SSGRSGGGGG SYGGSGGSSS RYSGGSDRSS GFGSFGSGGS SGGFGSDRSS QSSGRSSFGG
601: FGSNDGKRSY
Arabidopsis Description
RH9DEAD-box ATP-dependent RNA helicase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.