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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P13080_001 Banana plastid 50.76 81.3
GSMUA_Achr7P00980_001 Banana mitochondrion 31.3 71.43
KRH14557 Soybean mitochondrion 18.19 66.56
CDY46330 Canola nucleus 15.74 63.7
CDY46329 Canola mitochondrion 29.27 63.02
PGSC0003DMT400074131 Potato plastid 26.23 62.25
CDY37406 Canola mitochondrion 26.48 61.37
KRH73571 Soybean nucleus 30.54 60.67
Zm00001d031050_P002 Maize mitochondrion 31.22 60.39
Zm00001d041480_P001 Maize mitochondrion 30.37 59.93
EES17375 Sorghum mitochondrion 31.3 59.87
Bra023836.1-P Field mustard mitochondrion 31.22 59.81
Solyc07g044760.2.1 Tomato plastid 31.81 59.68
TraesCS5D01G057800.1 Wheat mitochondrion 30.29 59.57
Os12t0611200-01 Rice nucleus 31.64 59.55
TraesCS5B01G052100.1 Wheat mitochondrion 30.03 59.46
TraesCS5A01G047300.2 Wheat mitochondrion 30.71 58.93
AT3G22330.1 Thale cress mitochondrion 30.46 58.44
HORVU5Hr1G011460.3 Barley mitochondrion 30.88 58.4
CDY10634 Canola mitochondrion 29.7 58.31
KRG99044 Soybean mitochondrion 31.64 58.16
VIT_12s0142g00670.t01 Wine grape plastid 32.74 58.11
CDY37408 Canola mitochondrion 29.53 58.07
KRH45952 Soybean mitochondrion 29.7 58.02
Bra031349.1-P Field mustard mitochondrion 29.53 57.97
AT3G22310.1 Thale cress mitochondrion 29.7 57.54
Solyc12g006320.1.1 Tomato plastid 29.95 55.05
KRH14556 Soybean cytosol 12.35 50.87
GSMUA_Achr2P01980_001 Banana nucleus 23.69 40.23
GSMUA_Achr11P... Banana plastid 24.11 36.82
GSMUA_Achr7P05930_001 Banana nucleus 16.16 31.47
GSMUA_Achr4P19590_001 Banana nucleus 16.84 27.64
GSMUA_Achr10P... Banana cytosol 9.31 21.48
Protein Annotations
Gene3D:3.40.1090.10Gene3D:3.40.50.300MapMan:35.1InterPro:Acyl_Trfase/lysoPLipaseInterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166
GO:GO:0003674GO:GO:0003676GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSMUA_Achr2G13070_001EnsemblPlants:GSMUA_Achr2P13070_001EnsemblPlants:GSMUA_Achr2T13070_001
InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650InterPro:IPR014001InterPro:IPR014014UniProt:M0S7J8
InterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271PFscan:PS51192PFscan:PS51194PFscan:PS51195
PANTHER:PTHR24031PANTHER:PTHR24031:SF326InterPro:RNA_helicase_DEAD_Q_motifSMART:SM00487SMART:SM00490SUPFAM:SSF52151
SUPFAM:SSF52540SUPFAM:SSF81321TMHMM:TMhelixUniParc:UPI000295F4EESEG:seg:
Description
DEAD-box ATP-dependent RNA helicase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G13070_001]
Coordinates
chr2:+:15323027..15335623
Molecular Weight (calculated)
128003.0 Da
IEP (calculated)
8.644
GRAVY (calculated)
-0.044
Length
1182 amino acids
Sequence
(BLAST)
0001: MAPAPAPALL EPGVDVDKLS YEIFSILESK FLFGFDDHKP LPLQSSPASA SPVPPQPPAP RAPAGRVRIL SVDGGCRPSD ALLAAASLAR LESFLRDTPA
0101: RVADFFDVAA GSGAGGGPLG WVLRRKPGGL FRRVFGDATL RDTLKPADGY DFRIWEVCAA TCASPAAAVE MSSADGRTRI AAVGGGVSMG NPAAAAITHV
0201: LNNKQEFPFA ASVDELMVLS LGSSAAGVDS ASGRRRPVPS AAELVRIASE GVADMVDQAI AMAFGHNRTN NYVRIQANLF GLDNNYSART SNADRLICAM
0301: EERLSQRNVE SLLFRGKKIS DQTNAEKLEW FASELIKEHE RRKKSLIPVI VLKQVMTPRS SSWVAASASR RALAALVSSN FSLLPPSVAS ASSVPSSADG
0401: IVPFFRFAQQ IEFCGSQRRG IHFSAGPLGF RATDVAFAEY AVDEYYEEDR GSPEGVDEGL EIAKLGISQD IVTQLANRGI TKLFPIQRAV LEPAMQGQDM
0501: IGRARTGTGK TLAFGIPIMD KIIRFQAKHG CGRNPLAMVL APTRELARQV EKEFKESSKL YTLCVYGGSL ISQQMRALDS GVDVVVGTPG RIIDLLNRGA
0601: LNLSEIQFVV LDEADQMLNV GFAEDVERIL EKMPPKHQTL MFSATMPTWI QKLTRKYLKD PVNIDLIVVL LLLLLFMILH LYVSFPVVLK ILKFLCNVYL
0701: FFFLCYLLLF IFFFESTYVF HSFHLKDYVM LSQLFFPGVS FFYLINCLCD PALVFFNYLK MTLDLKSLFL FLLSTNCHLL RCFTNTMLFG INFLLLGFYG
0801: FTNKFEIIFY GKYLMYHIYP DKVVITLHSD DQKIAKASMF DVGDSDQKLA EGITLYSIVS DNYAKASILG PLIKEHAKGG KCILFTQTKR DADRLAYSMG
0901: RSFGCEALHG DISQGQRERT LAGFRDGRFN ILIATDVAAR GLDIPNVDLV IHYELPNTTE LFVHRSGRTG RAGKKGSAIL IHSYDQNRLV RGIEQEIGCR
1001: FIELPKITVE GGGEDMIGSM RGGRFDSHGS GRMGGSGFGR GGNYGRSRGF GDSGRHTGGF GESGSGRFGS FGGSTSGAPS RPGGSNFGRS DGFGNFSSGR
1101: SGGLGDSGAG RFGNFGSSGS GRFGSFGNSD SGRSSSFNDS SPSRSSGYGG SGRSSSFGSF GGGSSKDDGD DGWPGRSFMS SS
Best Arabidopsis Sequence Match ( AT3G22330.1 )
(BLAST)
001: MITTVLRRSL LDASKRNLSA SLTSINTVLF HNLAPAATRV SDLALIGSSD VKAGFPFGVE AKGIHFQSGP LDFRASMVSQ AGFAISESSE RRVGDSESVG
101: GDGLAISELG ISPEIVKALS SKGIEKLFPI QKAVLEPAME GRDMIGRART GTGKTLAFGI PIIDKIIKYN AKHGRGRNPL CLVLAPTREL ARQVEKEFRE
201: SAPSLDTICL YGGTPIGQQM RQLDYGVDVA VGTPGRVIDL MKRGALNLSE VQFVVLDEAD QMLQVGFAED VEIILEKLPE KRQSMMFSAT MPSWIRSLTK
301: KYLNNPLTVD LVGDSDQKLA DGITTYSIIA DSYGRASIIG PLVTEHAKGG KCIVFTQTKR DADRLSYALA RSFKCEALHG DISQSQRERT LAGFRDGHFN
401: ILVATDVAAR GLDVPNVDLI IHYELPNNTE TFVHRTGRTG RAGKKGSAIL IYSQDQSRAV KIIEREVGSR FTELPSIAVE RGSASMFEGI GSRSGGSFGG
501: GMRDRGSSFG GRSGGGGYGG SSGGYGGGRS GGSSNRYSGD SDRSGFGSFG MRSPEGYGSD RSSQSGGRSS FGGGRSGGSS NNRSSGFGDF GSDRSSQSGG
601: RSSFGGFGSN DGKRSY
Arabidopsis Description
RH53DEAD-box ATP-dependent RNA helicase 53, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.