Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY09484 | Canola | cytosol | 20.17 | 53.93 |
VIT_17s0053g00580.t01 | Wine grape | cytosol | 8.82 | 28.77 |
CDY70356 | Canola | cytosol | 44.54 | 28.42 |
CDY33397 | Canola | cytosol | 43.7 | 27.88 |
AT2G05830.1 | Thale cress | cytosol | 40.34 | 25.67 |
KRH37507 | Soybean | cytosol | 33.19 | 21.12 |
VIT_11s0016g00830.t01 | Wine grape | cytosol | 32.35 | 20.48 |
Solyc08g022210.2.1 | Tomato | cytosol, plastid | 31.93 | 20.32 |
PGSC0003DMT400064893 | Potato | cytosol | 31.93 | 20.32 |
Zm00001d049042_P001 | Maize | extracellular | 31.09 | 20.16 |
KXG28235 | Sorghum | cytosol | 30.67 | 19.89 |
GSMUA_Achr6P29170_001 | Banana | cytosol | 31.51 | 19.48 |
TraesCS4D01G104900.1 | Wheat | cytosol | 29.41 | 19.07 |
TraesCS4A01G204000.2 | Wheat | cytosol | 29.83 | 17.71 |
HORVU4Hr1G016410.7 | Barley | cytosol | 31.09 | 17.58 |
TraesCS4B01G107800.1 | Wheat | cytosol | 32.77 | 17.22 |
KRH12557 | Soybean | nucleus | 10.92 | 13.27 |
Os11t0217300-01 | Rice | cytosol, plasma membrane | 7.98 | 5.38 |
Protein Annotations
EnsemblPlants:CDY04295 | EnsemblPlantsGene:GSBRNA2T00118062001 | Gene3D:1.20.120.1840 | GO:A0A078EQR0 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0044237 | InterPro:IF-2B-related | InterPro:NagB/RpiA_transferase-like | KEGG:00270+5.3.1.23 | MetaCyc:PWY-4361 |
MetaCyc:PWY-7174 | PANTHER:PTHR43475 | PANTHER:PTHR43475:SF1 | PFAM:PF01008 | ProteinID:CDY04295 | ProteinID:CDY04295.1 |
SEG:seg | SUPFAM:SSF100950 | UniParc:UPI0004EEF532 | UniPathway:UPA00904 | MapMan:4.1.2.2.6.4.3 | : |
Description
BnaC06g25200D
Coordinates
chrLK031950:+:1112253..1114101
Molecular Weight (calculated)
27098.3 Da
IEP (calculated)
10.539
GRAVY (calculated)
-0.180
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSPRSNFLL LATLRRRTRV RLRKRVGMNG LRLILMRIWK IWMRMMRRRV LVKNMDEDDD IEFELDPTCC LMCHKKHKTI EKCMVHMQLT PKELSRISNS
101: FARRAIISTL SNHAIAIAAA LSLAVEVSNF SDFDGSSADA VAFLEKKLDY LVSSRPTAVN LADAALKLKQ LFCFSAENMF EDDVASNKAI GTFGSSLMRQ
201: QAKNPDKLSV LTHCNTGRKD STRSYIPVNI DLIQIKSQ
101: FARRAIISTL SNHAIAIAAA LSLAVEVSNF SDFDGSSADA VAFLEKKLDY LVSSRPTAVN LADAALKLKQ LFCFSAENMF EDDVASNKAI GTFGSSLMRQ
201: QAKNPDKLSV LTHCNTGRKD STRSYIPVNI DLIQIKSQ
001: MVVRGAPAIA IAAALSLAVE VFNFHGFDGS ASDAVAFLEN KLDYLVSSRP TAVNLADAAL KLKHVIAKAL ATATEAKSIF KAYIEASEDM LEDDVVSNKA
101: IGNFGLSLLR QQAKNPDKLS VLTHCNTGSL ATAGYGTALG VIRALHTQGI LERAYCTETR PFNQGSRLTA FELVHEKIPA TLIADSAAAA LMKDGRVDGV
201: IVGADRVASN GDTANKIGTY SLALCAKHHG IPFYVAAPLT SVDLSLSSGK EIVIEERSPK ELMHTHGGLG ERIAAPGISV WNPAFDMTPA ELIAGIITEK
301: GVITKNGNDT FDISSFAKKI TGNSSR
101: IGNFGLSLLR QQAKNPDKLS VLTHCNTGSL ATAGYGTALG VIRALHTQGI LERAYCTETR PFNQGSRLTA FELVHEKIPA TLIADSAAAA LMKDGRVDGV
201: IVGADRVASN GDTANKIGTY SLALCAKHHG IPFYVAAPLT SVDLSLSSGK EIVIEERSPK ELMHTHGGLG ERIAAPGISV WNPAFDMTPA ELIAGIITEK
301: GVITKNGNDT FDISSFAKKI TGNSSR
Arabidopsis Description
Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.