Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015169.1-P | Field mustard | cytosol | 91.71 | 92.2 |
| CDY33397 | Canola | cytosol | 91.44 | 91.69 |
| CDY70356 | Canola | cytosol | 90.64 | 90.88 |
| PGSC0003DMT400064893 | Potato | cytosol | 75.67 | 75.67 |
| Solyc08g022210.2.1 | Tomato | cytosol, plastid | 74.33 | 74.33 |
| VIT_11s0016g00830.t01 | Wine grape | cytosol | 71.93 | 71.54 |
| KRH37507 | Soybean | cytosol | 68.18 | 68.18 |
| KXG28235 | Sorghum | cytosol | 66.04 | 67.3 |
| Zm00001d049042_P001 | Maize | extracellular | 65.78 | 67.03 |
| KRH12557 | Soybean | nucleus | 34.49 | 65.82 |
| TraesCS4D01G104900.1 | Wheat | cytosol | 63.37 | 64.58 |
| GSMUA_Achr6P29170_001 | Banana | cytosol | 66.31 | 64.42 |
| TraesCS4A01G204000.2 | Wheat | cytosol | 65.51 | 61.1 |
| HORVU4Hr1G016410.7 | Barley | cytosol | 64.17 | 57.01 |
| TraesCS4B01G107800.1 | Wheat | cytosol | 64.44 | 53.2 |
| CDY09484 | Canola | cytosol | 12.57 | 52.81 |
| VIT_17s0053g00580.t01 | Wine grape | cytosol | 9.36 | 47.95 |
| CDY04295 | Canola | mitochondrion | 25.67 | 40.34 |
| Os11t0217300-01 | Rice | cytosol, plasma membrane | 13.37 | 14.16 |
Protein Annotations
| KEGG:00270+5.3.1.23 | Gene3D:1.20.120.1840 | Gene3D:3.40.50.10470 | MapMan:4.1.2.2.6.4.3 | EntrezGene:815134 | ProteinID:AAC95160.2 |
| ProteinID:AEC05975.1 | ProteinID:AEC05976.1 | ProteinID:AEC05977.1 | ArrayExpress:AT2G05830 | EnsemblPlantsGene:AT2G05830 | RefSeq:AT2G05830 |
| TAIR:AT2G05830 | RefSeq:AT2G05830-TAIR-G | EnsemblPlants:AT2G05830.1 | TAIR:AT2G05830.1 | EMBL:AY087601 | EMBL:AY099595 |
| EMBL:AY128839 | EMBL:BX820068 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009086 | GO:GO:0009506 | GO:GO:0009719 |
| GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019284 | GO:GO:0019509 | GO:GO:0044237 | GO:GO:0044249 |
| GO:GO:0046523 | GO:GO:0071281 | GO:GO:0071369 | GO:GO:0071732 | InterPro:IF-2B-related | InterPro:IF-M1Pi |
| InterPro:Initiation_fac_2B_a/b/d | HAMAP:MF_01678 | RefSeq:NP_001031339.1 | RefSeq:NP_027726.1 | RefSeq:NP_973428.1 | InterPro:NagB/RpiA_transferase-like |
| PFAM:PF01008 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR43475 | PANTHER:PTHR43475:SF1 | UniProt:Q9ZUG4 | SUPFAM:SSF100950 | TIGRFAMs:TIGR00512 |
| TIGRFAMs:TIGR00524 | UniParc:UPI00000A6DCE | SEG:seg | : | : | : |
Description
Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUG4]
Coordinates
chr2:+:2229539..2232149
Molecular Weight (calculated)
39614.4 Da
IEP (calculated)
6.245
GRAVY (calculated)
0.059
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEGDTTLK AICYKPGSLQ LLDQRKLPLE TIYLEIRDAS DGWSAIQEMV VRGAPAIAIA AALSLAVEVF NFHGFDGSAS DAVAFLENKL DYLVSSRPTA
101: VNLADAALKL KHVIAKALAT ATEAKSIFKA YIEASEDMLE DDVVSNKAIG NFGLSLLRQQ AKNPDKLSVL THCNTGSLAT AGYGTALGVI RALHTQGILE
201: RAYCTETRPF NQGSRLTAFE LVHEKIPATL IADSAAAALM KDGRVDGVIV GADRVASNGD TANKIGTYSL ALCAKHHGIP FYVAAPLTSV DLSLSSGKEI
301: VIEERSPKEL MHTHGGLGER IAAPGISVWN PAFDMTPAEL IAGIITEKGV ITKNGNDTFD ISSFAKKITG NSSR
101: VNLADAALKL KHVIAKALAT ATEAKSIFKA YIEASEDMLE DDVVSNKAIG NFGLSLLRQQ AKNPDKLSVL THCNTGSLAT AGYGTALGVI RALHTQGILE
201: RAYCTETRPF NQGSRLTAFE LVHEKIPATL IADSAAAALM KDGRVDGVIV GADRVASNGD TANKIGTYSL ALCAKHHGIP FYVAAPLTSV DLSLSSGKEI
301: VIEERSPKEL MHTHGGLGER IAAPGISVWN PAFDMTPAEL IAGIITEKGV ITKNGNDTFD ISSFAKKITG NSSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.